RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ADAMTS5Q9UNA0 930 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 SIP14410 1827 aa12.44□□□□□ -0.42
HDAC3-203ENST00000467533 DNAJC25-GNG10A0A024R161 153 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 RAD21O60216 631 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 EVX2Q03828 476 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 G3BP1Q13283 466 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC3-203ENST00000467533 SNRNP48Q6IEG0 339 aaKnown RBP12.43□□□□□ -0.42
HDAC3-203ENST00000467533 HFE2Q6ZVN8 426 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 ARMCX2Q7L311 632 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 DBNDD2Q9BQY9 259 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 TEX13BQ9BXU2 312 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 SEZ6LQ9BYH1 1024 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
HDAC3-203ENST00000467533 GRIN2DO15399 1336 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.42□□□□□ -0.42
HDAC3-203ENST00000467533 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
HDAC3-203ENST00000467533 ZEB2O60315 1214 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 PSMC6P62333 389 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 TNFAIP2Q03169 654 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 FSCN1Q16658 493 aaKnown RBP12.42□□□□□ -0.42
HDAC3-203ENST00000467533 TLK2Q86UE8 772 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 MCM9Q9NXL9 1143 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 MTUS1Q9ULD2 1270 aa12.42□□□□□ -0.42
HDAC3-203ENST00000467533 ASTN1O14525 1302 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 CYP2C9P11712 490 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 AKR1B1P15121 316 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 KCNJ6P48051 423 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 PTPN5P54829 565 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 NKX3-2P78367 333 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 MTX1Q13505 466 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 FAM83BQ5T0W9 1011 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 ANKRD35Q8N283 1001 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 PRSS33Q8NF86 280 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC3-203ENST00000467533 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
HDAC3-203ENST00000467533 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 LCHNA4D1U4 455 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 GRXCR2A6NFK2 248 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 RFC2P35250 354 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 PUS10Q3MIT2 529 aaKnown RBP12.4□□□□□ -0.42
HDAC3-203ENST00000467533 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 FGD4Q96M96 766 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 ALDH8A1Q9H2A2 487 aaPredicted RBP12.4□□□□□ -0.42
HDAC3-203ENST00000467533 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 TRMT13Q9NUP7 481 aaKnown RBP12.4□□□□□ -0.42
HDAC3-203ENST00000467533 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 RIPK3Q9Y572 518 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
HDAC3-203ENST00000467533 TNKSO95271 1327 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 GFRA3O60609 400 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 GNAI3P08754 354 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 SUPT20HL2P0C7V6 817 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 CYP2D6P10635 497 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
HDAC3-203ENST00000467533 KATNBL1Q9H079 304 aa12.39□□□□□ -0.43
HDAC3-203ENST00000467533 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
HDAC3-203ENST00000467533 USP34Q70CQ2 3546 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 MAGEB6P1A0A0J9YX57 407 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 H3BQ06 376 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 DYNC1LI2O43237 492 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 BAIAP3O94812 1187 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 EEF2P13639 858 aaKnown RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 PTGS1P23219 599 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 ZP2Q05996 745 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 API5Q9BZZ5 524 aaKnown RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 SUGCTQ9HAC7 445 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 GPR108Q9NPR9 543 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 GNEQ9Y223 722 aaKnown RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 FAM50BQ9Y247 325 aa12.38□□□□□ -0.43
HDAC3-203ENST00000467533 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
HDAC3-203ENST00000467533 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
HDAC3-203ENST00000467533 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
HDAC3-203ENST00000467533 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
HDAC3-203ENST00000467533 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
HDAC3-203ENST00000467533 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
HDAC3-203ENST00000467533 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
HDAC3-203ENST00000467533 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
HDAC3-203ENST00000467533 UPF3BQ9BZI7 483 aaKnown RBP12.37□□□□□ -0.43
HDAC3-203ENST00000467533 PRKAG3Q9UGI9 489 aa12.37□□□□□ -0.43
HDAC3-203ENST00000467533 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
HDAC3-203ENST00000467533 KMT2EQ8IZD2 1858 aa12.37□□□□□ -0.43
HDAC3-203ENST00000467533 PNMA6EA0A0J9YXQ4 647 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms