RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CDC23Q9UJX2 597 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 GAKO14976 1311 aa16.63■□□□□ 0.25
PRPF38B-204ENST00000467302 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 TUBB2AQ13885 445 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 KRT31Q15323 416 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 SRBD1Q8N5C6 995 aaKnown RBP16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 TUBB2BQ9BVA1 445 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 RWDD2AQ9UIY3 292 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 ERICH4A6NGS2 130 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 TFAP4Q01664 338 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 SMC1AQ14683 1233 aaKnown RBP16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 BRD3Q15059 726 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 IL17AQ16552 155 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 DPP8Q6V1X1 898 aaPredicted RBP16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 STAMQ92783 540 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 DYNLL2Q96FJ2 89 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 TTF2Q9UNY4 1162 aaKnown RBP16.62■□□□□ 0.25
PRPF38B-204ENST00000467302 POLR3GO15318 223 aaPredicted RBP16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 GTF2IP78347 998 aa16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 TMTC1Q8IUR5 882 aa16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 MAPKAPK5Q8IW41 473 aa16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 CEP112Q8N8E3 955 aa16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 ZC3H12CQ9C0D7 883 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 ANKZF1Q9H8Y5 726 aa16.61■□□□□ 0.25
PRPF38B-204ENST00000467302 MAP2K7O14733 419 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 OAS2P29728 719 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 CCT6AP40227 531 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 ERVK-24P63145 666 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 ZNF569Q5MCW4 686 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 HNRNPLLQ8WVV9 542 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 BLZF1Q9H2G9 400 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 RAB21Q9UL25 225 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 RNF225M0QZC1 329 aaPredicted RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 COBLO75128 1261 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 SPAG1Q07617 926 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 RRAGBQ5VZM2 374 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 EYA3Q99504 573 aa16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 ZCCHC17Q9NP64 241 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 SAP30BPQ9UHR5 308 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-204ENST00000467302 CTAGE9A4FU28 777 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 N4BP3O15049 544 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 SCG2P13521 617 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 ARHGAP25P42331 645 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 PAK1Q13153 545 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 TCP11X2Q5H9J9 407 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 STYK1Q6J9G0 422 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 DGKHQ86XP1 1220 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 ACRBPQ8NEB7 543 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 ZSWIM4Q9H7M6 989 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 ZNF287Q9HBT7 754 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 MYH1P12882 1939 aa16.59■□□□□ 0.25
PRPF38B-204ENST00000467302 ADAMTS3O15072 1205 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 ABL1P00519 1130 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 VEGFAP15692 232 aaPredicted RBP16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 TUBB4BP68371 445 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 TRIM14Q14142 442 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 SLC15A2Q16348 729 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 SLC35F6Q8N357 371 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 ANKS1AQ92625 1134 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 STK32BQ9NY57 414 aa16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 PUF60Q9UHX1 559 aaKnown RBP16.58■□□□□ 0.25
PRPF38B-204ENST00000467302 POTEB2H3BUK9 544 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 RHBDL3P58872 404 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 NLRP5P59047 1200 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 BEND6Q5SZJ8 279 aaPredicted RBP16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 ARL6IP4Q66PJ3 421 aaKnown RBP16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 CYP26C1Q6V0L0 522 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 NELFBQ8WX92 580 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.243e-7■■■□□ 19.2
PRPF38B-204ENST00000467302 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 MYO1AQ9UBC5 1043 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 FLT1P17948 1338 aa16.58■□□□□ 0.24
PRPF38B-204ENST00000467302 KCNJ18B7U540 433 aa16.57■□□□□ 0.24
PRPF38B-204ENST00000467302 H0YIN7 160 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms