RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 VEGFAP15692 232 aaPredicted RBP10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 NDUFA8P51970 172 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 MAP3K10Q02779 954 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 WWC2Q6AWC2 1192 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 SHC4Q6S5L8 630 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 GMCL1P1Q8NEA9 526 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 CSRNP1Q96S65 589 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 PPP1R9BQ96SB3 815 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 SEC63Q9UGP8 760 aaKnown RBP10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 FBXO2Q9UK22 296 aaPredicted RBP10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 BCS1LQ9Y276 419 aa10.92□□□□□ -0.66
APOBEC1-202ENST00000467171 FZD9O00144 591 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 PFKFB1P16118 471 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 MARCKSP29966 332 aaPredicted RBP10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 GNA11P29992 359 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 TYRO3Q06418 890 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 CCDC173Q0VFZ6 552 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 CAMK4Q16566 473 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 EARS2Q5JPH6 523 aaKnown RBP10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 RBM26Q5T8P6 1007 aaKnown RBP10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 TYW1BQ6NUM6 668 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 FERMT2Q96AC1 680 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 PANK2Q9BZ23 570 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 C6orf50Q9HD87 102 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 PGAP2Q9UHJ9 254 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 PCDHB6Q9Y5E3 794 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 CDK5RAP2Q96SN8 1893 aa10.91□□□□□ -0.66
APOBEC1-202ENST00000467171 CNTNAP1P78357 1384 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 TCHHQ07283 1943 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 PNMA6FA0A0J9YX94 578 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 A0A1B0GVL5 298 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 TCP10L2B9ZVM9 353 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 WNT10BO00744 389 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 ZNF202O95125 648 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 EEF2P13639 858 aaKnown RBP10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 SYKP43405 635 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 ICA1Q05084 483 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 SEPT2Q15019 361 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 TTC38Q5R3I4 469 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 HEATR3Q7Z4Q2 680 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 PIGSQ96S52 555 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 ZBED2Q9BTP6 218 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 MYOZ2Q9NPC6 264 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 PCDHA6Q9UN73 950 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 PCDHA8Q9Y5H6 950 aa10.9□□□□□ -0.66
APOBEC1-202ENST00000467171 MYH1P12882 1939 aa10.9□□□□□ -0.67
APOBEC1-202ENST00000467171 CLRN2A0PK11 232 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 TNNI2P48788 182 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 NAPAP54920 295 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 ATP2C1P98194 919 aaPredicted RBP10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 ORC2Q13416 577 aaPredicted RBP10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 ARL6IP4Q66PJ3 421 aaKnown RBP10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 PIK3AP1Q6ZUJ8 805 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 KRT25Q7Z3Z0 450 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 CLEC10AQ8IUN9 316 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 TEX2Q8IWB9 1127 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 CKAP2LQ8IYA6 745 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 PIBF1Q8WXW3 757 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 PDLIM2Q96JY6 352 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 JMJD4Q9H9V9 463 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 MRVI1Q9Y6F6 885 aa10.89□□□□□ -0.67
APOBEC1-202ENST00000467171 PSME4Q14997 1843 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 FRMPD2Q68DX3 1309 aaPredicted RBP10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 CCDC194A0A1B0GVG4 234 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 SMCO2A6NFE2 343 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 F5H6K3 240 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 ZBTB5O15062 677 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 GH2P01242 217 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 SLURP2P0DP57 97 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 SLC1A4P43007 532 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 KLRC3Q07444 240 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 RRP1BQ14684 758 aaKnown RBP10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 CCDC96Q2M329 555 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 BTNL9Q6UXG8 535 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 RASGRP2Q7LDG7 609 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
APOBEC1-202ENST00000467171 CLIC6Q96NY7 704 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms