RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 BMP7P18075 431 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 PI3P19957 117 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 ARL4AP40617 200 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 CRTC3Q6UUV7 619 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 C7orf61Q8IZ16 206 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 TAB3Q8N5C8 712 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 MARCH10Q8NA82 808 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 TMEM87AQ8NBN3 555 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 DACT3Q96B18 629 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 ACSL6Q9UKU0 697 aa7.59□□□□□ -1.19
PRPF40A-205ENST00000467114 C9IYK1 514 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 GSNP06396 782 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 IMPDH2P12268 514 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 TMEM52Q8NDY8 209 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 KRTAP4-11Q9BYQ6 195 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 ZCCHC4Q9H5U6 513 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 EPB41L4AQ9HCS5 686 aaPredicted RBP7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 AP5S1Q9NUS5 200 aa7.58□□□□□ -1.2
PRPF40A-205ENST00000467114 TRIM13O60858 407 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 PRKCAP17252 672 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 CDR1P51861 262 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 PMS1P54277 932 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 TMEM62Q0P6H9 643 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 ANKRD39Q53RE8 183 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 RTP2Q5QGT7 225 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 MZB1Q8WU39 189 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 TNFRSF12AQ9NP84 129 aa7.57□□□□□ -1.2
PRPF40A-205ENST00000467114 ZNF76P36508 570 aa7.56□□□□□ -1.2
PRPF40A-205ENST00000467114 CYP4F8P98187 520 aa7.56□□□□□ -1.2
PRPF40A-205ENST00000467114 CBX2Q14781 532 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-205ENST00000467114 CCDC144CPQ8IYA2 1237 aa7.56□□□□□ -1.2
PRPF40A-205ENST00000467114 SMARCC1Q92922 1105 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-205ENST00000467114 TM9SF2Q99805 663 aa7.56□□□□□ -1.2
PRPF40A-205ENST00000467114 A0A0G2JLL6 359 aaPredicted RBP7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 FANCCQ00597 558 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 LCE5AQ5TCM9 118 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 METTL16Q86W50 562 aaKnown RBP7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 TMEFF1Q8IYR6 380 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 NUP43Q8NFH3 380 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 JMJD8Q96S16 334 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 SLC12A9Q9BXP2 914 aa7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
PRPF40A-205ENST00000467114 FAM86C2PA6NEL3 165 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 BUD31P41223 144 aaPredicted RBP7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 RAB3GAP1Q15042 981 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 TMC6Q7Z403 805 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 USP48Q86UV5 1035 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 IGDCC3Q8IVU1 814 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 RELTQ969Z4 430 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 METTL5Q9NRN9 209 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 IMPACTQ9P2X3 320 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
PRPF40A-205ENST00000467114 NUDT19A8MXV4 375 aa7.53□□□□□ -1.2
PRPF40A-205ENST00000467114 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-205ENST00000467114 RPTNQ6XPR3 784 aa7.53□□□□□ -1.2
PRPF40A-205ENST00000467114 FAM129CQ86XR2 697 aa7.53□□□□□ -1.2
PRPF40A-205ENST00000467114 GSTM1P09488 218 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 ZNF445P59923 1031 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 MVKQ03426 396 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 AXDND1Q5T1B0 1012 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 DCAF15Q66K64 600 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 CWF19L1Q69YN2 538 aaKnown RBP7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 CNKSR3Q6P9H4 555 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 FERD3LQ96RJ6 166 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 XYLT2Q9H1B5 865 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 GP6Q9HCN6 339 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.21
PRPF40A-205ENST00000467114 H0Y8X5 98 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 NR1I3Q14994 352 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 ZNF394Q53GI3 561 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 NAT16Q8N8M0 369 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 RTEL1Q9NZ71 1219 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
PRPF40A-205ENST00000467114 SCAMP3O14828 347 aaKnown RBP7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 FGF10O15520 208 aaPredicted RBP7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 SASH1O94885 1247 aa7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 MSL3P1P0C860 447 aa7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 CD247P20963 164 aa7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 MAPKAPK2P49137 400 aa7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 RBM25P49756 843 aaKnown RBP7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 PLEKHN1Q494U1 663 aaPredicted RBP7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 NOL9Q5SY16 702 aaKnown RBP7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 CYP2R1Q6VVX0 501 aa7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 PCDHGB7Q9Y5F8 929 aa7.5□□□□□ -1.21
PRPF40A-205ENST00000467114 FOXD2O60548 495 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-205ENST00000467114 NOP2P46087 812 aaKnown RBP7.49□□□□□ -1.21
PRPF40A-205ENST00000467114 RACK1P63244 317 aaKnown RBP7.49□□□□□ -1.21
PRPF40A-205ENST00000467114 HDLBPQ00341 1268 aaKnown RBP7.49□□□□□ -1.21
PRPF40A-205ENST00000467114 BRF1Q92994 677 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms