RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 BIRC2Q13490 618 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 SMYD4Q8IYR2 804 aaPredicted RBP20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 CRACR2AQ9BSW2 395 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 SAMSN1Q9NSI8 373 aaKnown RBP20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 GOLGA6CA6NDK9 693 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 EIF3HO15372 352 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 GOLGA6DP0CG33 693 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 KLHL10Q6JEL2 608 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 NGLY1Q96IV0 654 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 GOLGA6AQ9NYA3 693 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 NFE2L3Q9Y4A8 694 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 ARHGAP25P42331 645 aa20.2■□□□□ 0.82
SNAPC3-205ENST00000467062 CICQ96RK0 1608 aaPredicted RBP20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 TRIM75PA6NK02 468 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 A6NNZ2 444 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 STX17P56962 302 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 TUBB8Q3ZCM7 444 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 COG1Q8WTW3 980 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 PHF20Q9BVI0 1012 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 BRIP1Q9BX63 1249 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 CD248Q9HCU0 757 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 ADGRG1Q9Y653 693 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 MYO1FO00160 1098 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 ACTN4O43707 911 aaKnown RBP20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 ZPR1O75312 459 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 KRT2P35908 639 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 BARGINQ6ZT62 677 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 NAPGQ99747 312 aaPredicted RBP20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 NAA15Q9BXJ9 866 aaKnown RBP20.19■□□□□ 0.82
SNAPC3-205ENST00000467062 CDC25AP30304 524 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 GRIK5Q16478 980 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 WLSQ5T9L3 541 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 SYMPKQ92797 1274 aaKnown RBP20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 TRIM6Q9C030 488 aaPredicted RBP20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 MCM9Q9NXL9 1143 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 NID2Q14112 1375 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 BAZ2AQ9UIF9 1905 aaKnown RBP20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 DOCK2Q92608 1830 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 GGCXP38435 758 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 SF3B2Q13435 895 aaKnown RBP20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 PANX2Q96RD6 677 aa20.18■□□□□ 0.82
SNAPC3-205ENST00000467062 ARAP2Q8WZ64 1704 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 TSPY2A6NKD2 308 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 DIXDC1Q155Q3 683 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 NPY5RQ15761 445 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 ECM29Q5VYK3 1845 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 KLHL33A6NCF5 533 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 PRPF3O43395 683 aaKnown RBP20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 XBP1P17861 261 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 PAX7P23759 505 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 MICALCLQ6ZW33 695 aa20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 NOA1Q8NC60 698 aaKnown RBP20.17■□□□□ 0.82
SNAPC3-205ENST00000467062 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 MYH2Q9UKX2 1941 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 MEFVO15553 781 aaPredicted RBP20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 GNGT1P63211 74 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 NAIF1Q69YI7 327 aaPredicted RBP20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 ARHGEF1Q92888 912 aaKnown RBP20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 ANKIB1Q9P2G1 1089 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 A0A1B0GUA9 196 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 SARSP49591 514 aaKnown RBP20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 MTF1Q14872 753 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 NFIXQ14938 502 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 TMTC3Q6ZXV5 915 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 SLC35F6Q8N357 371 aa20.16■□□□□ 0.82
SNAPC3-205ENST00000467062 PHLPP1O60346 1717 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 AKR1B15C9JRZ8 316 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 MCM7P33993 719 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 PTGDRQ13258 359 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 MORC3Q14149 939 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 ZKSCAN8Q15776 578 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 RASGRP4Q8TDF6 673 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 RIN2Q8WYP3 895 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 GPKOWQ92917 476 aaPredicted RBP eCLIP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 KLC4Q9NSK0 619 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 NARFQ9UHQ1 456 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 SOWAHDA6NJG2 315 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 CD44P16070 742 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 USP14P54578 494 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 SLC10A5Q5PT55 438 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 MTA3Q9BTC8 594 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 BLZF1Q9H2G9 400 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 HOOK1Q9UJC3 728 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 CEP131Q9UPN4 1083 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 PLCH1Q4KWH8 1693 aa20.15■□□□□ 0.82
SNAPC3-205ENST00000467062 CHD4Q14839 1912 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 TM4SF1P30408 202 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 NLRP5P59047 1200 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 RASGRP2Q7LDG7 609 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 DZIP1Q86YF9 867 aaKnown RBP20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 STAG2Q8N3U4 1231 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 SLC44A5Q8NCS7 719 aa20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 MYO1AQ9UBC5 1043 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms