RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 QRICH1Q2TAL8 776 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 CCDC12Q8WUD4 166 aaPredicted RBP15.25■□□□□ 0.03
SEC22A-203ENST00000466950 KIFC2Q96AC6 838 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 C8orf76Q96K31 380 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 BARHL2Q9NY43 387 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 HOXC10Q9NYD6 342 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
SEC22A-203ENST00000466950 ZNFX1Q9P2E3 1918 aaKnown RBP15.25■□□□□ 0.03
SEC22A-203ENST00000466950 MGAMO43451 1857 aa15.25■□□□□ 0.03
SEC22A-203ENST00000466950 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 MYH7BA7E2Y1 1941 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 LCTP09848 1927 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 ESYT2A0FGR8 921 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 ICAM1P05362 532 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 SREBF2Q12772 1141 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
SEC22A-203ENST00000466950 WWC2Q6AWC2 1192 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 REPS2Q8NFH8 660 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 FBXO18Q8NFZ0 1043 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 AMNQ9BXJ7 453 aa15.24■□□□□ 0.03
SEC22A-203ENST00000466950 ASCC2Q9H1I8 757 aaPredicted RBP15.24■□□□□ 0.03
SEC22A-203ENST00000466950 ZNF236Q9UL36 1845 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 BTBD19C9JJ37 291 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 STXBP3O00186 592 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 VWA5AO00534 786 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 STX6O43752 255 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 ZBED4O75132 1171 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 PPFIA3O75145 1194 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 SYT1P21579 422 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 NUCB2P80303 420 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 NOGQ13253 232 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 TRIM29Q14134 588 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 FBXO11Q86XK2 927 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
SEC22A-203ENST00000466950 ATG4CQ96DT6 458 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 VAT1LQ9HCJ6 419 aa15.23■□□□□ 0.03
SEC22A-203ENST00000466950 ZNF536O15090 1300 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 ABCB11O95342 1321 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 PPP1R11O60927 126 aaPredicted RBP15.22■□□□□ 0.03
SEC22A-203ENST00000466950 CALML3P27482 149 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 HERVK_113P62684 666 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 MKRN3Q13064 507 aaKnown RBP15.22■□□□□ 0.03
SEC22A-203ENST00000466950 DEFB115Q30KQ5 88 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 DAGLBQ8NCG7 672 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 PARK7Q99497 189 aaKnown RBP15.22■□□□□ 0.03
SEC22A-203ENST00000466950 PHF20Q9BVI0 1012 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 MAF1Q9H063 256 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 GLT8D2Q9H1C3 349 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 VPS54Q9P1Q0 977 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 PLXNA1Q9UIW2 1896 aa15.22■□□□□ 0.03
SEC22A-203ENST00000466950 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.03
SEC22A-203ENST00000466950 H3BQV1 296 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 PDHXO00330 501 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 BRD1O95696 1058 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 MMP1P03956 469 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 TM4SF4P48230 202 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 NAPAP54920 295 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 KRT40Q6A162 431 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 TYW1BQ6NUM6 668 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.035e-7■■■■□ 23.9
SEC22A-203ENST00000466950 SHISA4Q96DD7 197 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 PTPN18Q99952 460 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 ZMYND12Q9H0C1 365 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 CHMP5Q9NZZ3 219 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
SEC22A-203ENST00000466950 MTMR6Q9Y217 621 aa15.21■□□□□ 0.03
SEC22A-203ENST00000466950 CTDP1Q9Y5B0 961 aaPredicted RBP15.21■□□□□ 0.03
SEC22A-203ENST00000466950 DTNBO60941 627 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 GNA11P29992 359 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 COPB2P35606 906 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
SEC22A-203ENST00000466950 TKFCQ3LXA3 575 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 OTUD7BQ6GQQ9 843 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 PIBF1Q8WXW3 757 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 TEX13BQ9BXU2 312 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 BRMS1Q9HCU9 246 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
SEC22A-203ENST00000466950 ADGRA2Q96PE1 1338 aa15.19■□□□□ 0.02
SEC22A-203ENST00000466950 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
SEC22A-203ENST00000466950 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
SEC22A-203ENST00000466950 GHRHRQ02643 423 aa15.19■□□□□ 0.02
SEC22A-203ENST00000466950 TMEM132BQ14DG7 1078 aa15.19■□□□□ 0.02
SEC22A-203ENST00000466950 SAFBQ15424 915 aaKnown RBP eCLIP15.19■□□□□ 0.02
SEC22A-203ENST00000466950 NPY5RQ15761 445 aa15.19■□□□□ 0.02
SEC22A-203ENST00000466950 CCDC174Q6PII3 467 aa15.19■□□□□ 0.02
SEC22A-203ENST00000466950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms