RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 PCDH10Q9P2E7 1040 aa29.54■■■□□ 2.32
SDF2L1-202ENST00000466935 PRR12Q9ULL5 1215 aa29.54■■■□□ 2.32
SDF2L1-202ENST00000466935 ZMYND8Q9ULU4 1186 aaPredicted RBP29.54■■■□□ 2.32
SDF2L1-202ENST00000466935 AKR1A1P14550 325 aa29.53■■■□□ 2.32
SDF2L1-202ENST00000466935 GJC2Q5T442 439 aaPredicted RBP29.53■■■□□ 2.32
SDF2L1-202ENST00000466935 MCM3APO60318 1980 aa29.53■■■□□ 2.32
SDF2L1-202ENST00000466935 PDE4AP27815 886 aa29.52■■■□□ 2.32
SDF2L1-202ENST00000466935 LRRC41Q15345 812 aa29.52■■■□□ 2.32
SDF2L1-202ENST00000466935 CCDC96Q2M329 555 aa29.52■■■□□ 2.32
SDF2L1-202ENST00000466935 ANO1Q5XXA6 986 aa29.52■■■□□ 2.32
SDF2L1-202ENST00000466935 RNF146Q9NTX7 359 aa29.52■■■□□ 2.32
SDF2L1-202ENST00000466935 TAL1P17542 331 aaPredicted RBP29.51■■■□□ 2.31
SDF2L1-202ENST00000466935 CCDC178Q5BJE1 867 aa29.51■■■□□ 2.31
SDF2L1-202ENST00000466935 TTC22Q5TAA0 569 aa29.51■■■□□ 2.31
SDF2L1-202ENST00000466935 XPNPEP3Q9NQH7 507 aa29.51■■■□□ 2.31
SDF2L1-202ENST00000466935 CTNNA3Q9UI47 895 aa29.51■■■□□ 2.31
SDF2L1-202ENST00000466935 SNAI1O95863 264 aaPredicted RBP29.5■■■□□ 2.31
SDF2L1-202ENST00000466935 RASGRP2Q7LDG7 609 aa29.5■■■□□ 2.31
SDF2L1-202ENST00000466935 AGBL1Q96MI9 1066 aa29.5■■■□□ 2.31
SDF2L1-202ENST00000466935 HOMER2Q9NSB8 354 aa29.5■■■□□ 2.31
SDF2L1-202ENST00000466935 NEDD4P46934 1319 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 RNF180Q86T96 592 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 FAM133AQ8N9E0 248 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 FGD4Q96M96 766 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 TRERF1Q96PN7 1200 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 RANBP17Q9H2T7 1088 aaKnown RBP29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 ABHD16BQ9H3Z7 469 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 FAM184BQ9ULE4 1060 aa29.49■■■□□ 2.31
SDF2L1-202ENST00000466935 RAD50Q92878 1312 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 ICAM1P05362 532 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 PDHBP11177 359 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 SYN1P17600 705 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 SNX17Q15036 470 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 IMMTQ16891 758 aaKnown RBP29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 DGKHQ86XP1 1220 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 A1CFQ9NQ94 594 aaKnown RBP29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 PNMA2Q9UL42 364 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 PHF24Q9UPV7 400 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 MTMR7Q9Y216 660 aa29.48■■■□□ 2.31
SDF2L1-202ENST00000466935 POTEB2H3BUK9 544 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 SNHG28P0DPA3 235 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 ALAS1P13196 640 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 GSPT1P15170 499 aaKnown RBP29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 MAGEA10P43363 369 aaPredicted RBP29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 SYDE2Q5VT97 1194 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 C1orf53Q5VUE5 145 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 IQCA1Q86XH1 822 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 CHMP4CQ96CF2 233 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 DNAH12Q6ZR08 3092 aa29.47■■■□□ 2.31
SDF2L1-202ENST00000466935 ATN1P54259 1190 aaPredicted RBP29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 RTP1P59025 263 aa29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 IRX6P78412 446 aaPredicted RBP29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 ACVR2BQ13705 512 aa29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 CCDC174Q6PII3 467 aa29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 SLC39A5Q6ZMH5 540 aa29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 CCPG1Q9ULG6 757 aa29.46■■■□□ 2.31
SDF2L1-202ENST00000466935 ADCYAP1R1P41586 468 aa29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 ZNF543Q08ER8 600 aa29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 TTBK2Q6IQ55 1244 aa29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 ARMCX2Q7L311 632 aa29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 ANKS1AQ92625 1134 aa29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 TSEN34Q9BSV6 310 aaKnown RBP29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 ZHX1Q9UKY1 873 aaPredicted RBP29.45■■■□□ 2.31
SDF2L1-202ENST00000466935 ASB14A6NK59 587 aa29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 ADAMTS4O75173 837 aa29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 DUSP11O75319 330 aaKnown RBP29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 MYCNP04198 464 aaPredicted RBP29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 GPATCH4Q5T3I0 446 aaKnown RBP29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 RUFY2Q8WXA3 655 aa29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 CNNM2Q9H8M5 875 aa29.44■■■□□ 2.3
SDF2L1-202ENST00000466935 KDM4AO75164 1064 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 PGK1P00558 417 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 SLC16A2P36021 539 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 CNTN2Q02246 1040 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 CCDC144CPQ8IYA2 1237 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 KRT23Q9C075 422 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 GPCPD1Q9NPB8 672 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 FRMPD2Q68DX3 1309 aaPredicted RBP29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 SYNRGQ9UMZ2 1314 aa29.43■■■□□ 2.3
SDF2L1-202ENST00000466935 LCTP09848 1927 aa29.42■■■□□ 2.3
SDF2L1-202ENST00000466935 SNAP25P60880 206 aa29.42■■■□□ 2.3
SDF2L1-202ENST00000466935 MUM1L1Q5H9M0 696 aa29.42■■■□□ 2.3
SDF2L1-202ENST00000466935 KATNBL1Q9H079 304 aa29.42■■■□□ 2.3
SDF2L1-202ENST00000466935 CYP39A1Q9NYL5 469 aa29.42■■■□□ 2.3
SDF2L1-202ENST00000466935 LRRC37A2A6NM11 1700 aa29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 CST5P28325 142 aaPredicted RBP29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 KLHDC9Q8NEP7 349 aa29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 PRKAG2Q9UGJ0 569 aa29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 ATP11BQ9Y2G3 1177 aa29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 WDR19Q8NEZ3 1342 aa29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 LTBP2Q14767 1821 aa29.41■■■□□ 2.3
SDF2L1-202ENST00000466935 SOWAHBA6NEL2 793 aa29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 MOXD2PA6NHM9 499 aa29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 B4E1Z4 1266 aa29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 CCDC144BQ3MJ40 725 aa29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 ZSCAN10Q96SZ4 725 aaPredicted RBP29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 ZKSCAN3Q9BRR0 538 aa29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 UBE2OQ9C0C9 1292 aaKnown RBP29.4■■■□□ 2.3
SDF2L1-202ENST00000466935 IL25Q9H293 177 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms