RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 RBPJLQ9UBG7 517 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 PLXNB2O15031 1838 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 ZNF236Q9UL36 1845 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
NPHP4-205ENST00000466897 CNMDO75829 334 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 ICAM1P05362 532 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 COPB2P35606 906 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 CUL4AQ13619 759 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 TMEM132BQ14DG7 1078 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 RRP36Q96EU6 259 aaKnown RBP17.6■□□□□ 0.41
NPHP4-205ENST00000466897 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 BTBD7Q9P203 1132 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 ZNF536O15090 1300 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 PCNTO95613 3336 aa17.6■□□□□ 0.41
NPHP4-205ENST00000466897 PNMA6FA0A0J9YX94 578 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 ERVK-9P63128 1117 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 ERVK-24P63145 666 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 QRICH1Q2TAL8 776 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 GPRC5AQ8NFJ5 357 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 BEGAINQ9BUH8 593 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 SPATC1LQ9H0A9 340 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 TXNRD2Q9NNW7 524 aa17.59■□□□□ 0.41
NPHP4-205ENST00000466897 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 ZNFX1Q9P2E3 1918 aaKnown RBP17.59■□□□□ 0.41
NPHP4-205ENST00000466897 TRPA1O75762 1119 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 SLC25A27O95847 323 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
NPHP4-205ENST00000466897 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
NPHP4-205ENST00000466897 CCNA1P78396 465 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 TKFCQ3LXA3 575 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
NPHP4-205ENST00000466897 RIOX2Q8IUF8 465 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 CCDC83Q8IWF9 413 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.4
NPHP4-205ENST00000466897 ANKRD13CQ8N6S4 541 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 SMARCC2Q8TAQ2 1214 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 PIGSQ96S52 555 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 MAF1Q9H063 256 aa17.58■□□□□ 0.4
NPHP4-205ENST00000466897 STAT3P40763 770 aa17.57■□□□□ 0.4
NPHP4-205ENST00000466897 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
NPHP4-205ENST00000466897 PFKFB3Q16875 520 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-205ENST00000466897 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
NPHP4-205ENST00000466897 FBXO11Q86XK2 927 aa17.57■□□□□ 0.4
NPHP4-205ENST00000466897 CCDC82Q8N4S0 544 aa17.57■□□□□ 0.4
NPHP4-205ENST00000466897 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
NPHP4-205ENST00000466897 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
NPHP4-205ENST00000466897 VAT1LQ9HCJ6 419 aa17.57■□□□□ 0.4
NPHP4-205ENST00000466897 ABCB11O95342 1321 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 DEXIO95424 95 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
NPHP4-205ENST00000466897 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
NPHP4-205ENST00000466897 SNRNP48Q6IEG0 339 aaKnown RBP17.56■□□□□ 0.4
NPHP4-205ENST00000466897 HOMER1Q86YM7 354 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 TEX2Q8IWB9 1127 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 PHKBQ93100 1093 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 SLC26A6Q9BXS9 759 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 RAVER2Q9HCJ3 691 aaKnown RBP17.56■□□□□ 0.4
NPHP4-205ENST00000466897 CPA4Q9UI42 421 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 CCPG1Q9ULG6 757 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-205ENST00000466897 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-205ENST00000466897 CASP8AP2Q9UKL3 1982 aa17.56■□□□□ 0.4
NPHP4-205ENST00000466897 PLXNA1Q9UIW2 1896 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 PTPDC1A2A3K4 754 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 PPP1R11O60927 126 aaPredicted RBP17.55■□□□□ 0.4
NPHP4-205ENST00000466897 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 SCG2P13521 617 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 PKN1Q16512 942 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 Q3C1V9 767 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 CCDC174Q6PII3 467 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 CPXCR1Q8N123 301 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 CHST13Q8NET6 341 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 WASF1Q92558 559 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 AGBL1Q96MI9 1066 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 MOV10L1Q9BXT6 1211 aaKnown RBP17.55■□□□□ 0.4
NPHP4-205ENST00000466897 R3HDMLQ9H3Y0 253 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 MROH8Q9H579 483 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 LCTP09848 1927 aa17.55■□□□□ 0.4
NPHP4-205ENST00000466897 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 DOCK3Q8IZD9 2030 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 MAPK4P31152 587 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 SNAP25P60880 206 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 BECN1Q14457 450 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 SAMD3Q8N6K7 520 aa17.54■□□□□ 0.4
NPHP4-205ENST00000466897 SH3GLB2Q9NR46 395 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms