RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 NUP43Q8NFH3 380 aa6.89□□□□□ -1.31
CHMP2B-202ENST00000466696 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
CHMP2B-202ENST00000466696 KLHL14Q9P2G3 628 aa6.89□□□□□ -1.31
CHMP2B-202ENST00000466696 NCANO14594 1321 aa6.89□□□□□ -1.31
CHMP2B-202ENST00000466696 EPHB3P54753 998 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 FANCCQ00597 558 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 RAB3GAP1Q15042 981 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 ANKRD39Q53RE8 183 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 RTP2Q5QGT7 225 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 NAT16Q8N8M0 369 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 MZB1Q8WU39 189 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 TNFRSF12AQ9NP84 129 aa6.88□□□□□ -1.31
CHMP2B-202ENST00000466696 IRS4O14654 1257 aaPredicted RBP6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 SHOXO15266 292 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 AFF3P51826 1226 aaKnown RBP6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 NOL9Q5SY16 702 aaKnown RBP6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 HLA-DQA1Q5Y7H0 255 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 MARCH10Q8NA82 808 aaPredicted RBP6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 RBBP8NLQ8NC74 664 aaPredicted RBP6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 TMEM52Q8NDY8 209 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 DACT3Q96B18 629 aaPredicted RBP6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 KCNC2Q96PR1 638 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 JMJD8Q96S16 334 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 SLC12A9Q9BXP2 914 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 IMPACTQ9P2X3 320 aa6.87□□□□□ -1.31
CHMP2B-202ENST00000466696 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 A0A1W2PQ27 194 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 A0A1W2PQ64 194 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 A0A1W2PQC6 194 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 A0A1W2PQD8 194 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 GSTM1P09488 218 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 NOP2P46087 812 aaKnown RBP6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 CEBPAP49715 358 aaPredicted RBP6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 CDR1P51861 262 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 CBX2Q14781 532 aaPredicted RBP6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 ZNF394Q53GI3 561 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 TMCO4Q5TGY1 634 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 TDRD10Q5VZ19 366 aaKnown RBP6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 FBXW10Q5XX13 1052 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 TMC6Q7Z403 805 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 JAMLQ86YT9 394 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 C20orf173Q96LM9 149 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 SRRTQ9BXP5 876 aaKnown RBP6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 GP6Q9HCN6 339 aa6.86□□□□□ -1.31
CHMP2B-202ENST00000466696 NUDT19A8MXV4 375 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 TRIM13O60858 407 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 GUCY2CP25092 1073 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 NR1I3Q14994 352 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 DCAF15Q66K64 600 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 CYP2R1Q6VVX0 501 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 PPFIBP1Q86W92 1011 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 LDHDQ86WU2 507 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 RNF34Q969K3 372 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 RELTQ969Z4 430 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 PCDHGB7Q9Y5F8 929 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 FHOD1Q9Y613 1164 aa6.85□□□□□ -1.31
CHMP2B-202ENST00000466696 H0Y8X5 98 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 SASH1O94885 1247 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 CD247P20963 164 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 ZNF445P59923 1031 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 CNKSR3Q6P9H4 555 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 RPTNQ6XPR3 784 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 EPB41L4AQ9HCS5 686 aaPredicted RBP6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 SF3B6Q9Y3B4 125 aaKnown RBP6.84□□□□□ -1.31
CHMP2B-202ENST00000466696 TP53P04637 393 aaPredicted RBP6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 ITGA4P13612 1032 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 MAPKAPK2P49137 400 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 MVKQ03426 396 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 FAM129CQ86XR2 697 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 IGDCC3Q8IVU1 814 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 TMEFF1Q8IYR6 380 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 FIBCD1Q8N539 461 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 RGS22Q8NE09 1264 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 BRF1Q92994 677 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 DDX41Q9UJV9 622 aaKnown RBP6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 ZNF214Q9UL59 606 aaPredicted RBP6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 PPT2Q9UMR5 302 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 PCDHA5Q9Y5H7 936 aa6.83□□□□□ -1.32
CHMP2B-202ENST00000466696 A0A087WZG4 1122 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 A0A1W2PQJ5 194 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 FGF10O15520 208 aaPredicted RBP6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 POU4F1Q01851 419 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 TCEAL1Q15170 157 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 ZYXQ15942 572 aaKnown RBP6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 PLEKHN1Q494U1 663 aaPredicted RBP6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 ZC3H14Q6PJT7 736 aaKnown RBP6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 RUFY4Q6ZNE9 571 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 LSRQ86X29 649 aaPredicted RBP6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 SPATA32Q96LK8 384 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 ZNF451Q9Y4E5 1061 aa6.82□□□□□ -1.32
CHMP2B-202ENST00000466696 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
CHMP2B-202ENST00000466696 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
CHMP2B-202ENST00000466696 BUB1BO60566 1050 aaPredicted RBP6.81□□□□□ -1.32
CHMP2B-202ENST00000466696 TBC1D8O95759 1140 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms