RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 BEX3Q00994 111 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 ICA1Q05084 483 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 ZNF318Q5VUA4 2279 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 MAGEB6Q8N7X4 407 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 ZNF512BQ96KM6 892 aaPredicted RBP17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 PPP1R9AQ9ULJ8 1098 aa17.85■□□□□ 0.45
HMGXB4-206ENST00000466438 NAV1Q8NEY1 1877 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 GRIN2DO15399 1336 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 KIF28PB7ZC32 967 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 IDH1O75874 414 aaKnown RBP17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 ACTN1P12814 892 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 FOXK2Q01167 660 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 ALDH1L2Q3SY69 923 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 CLEC10AQ8IUN9 316 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 USP34Q70CQ2 3546 aa17.84■□□□□ 0.45
HMGXB4-206ENST00000466438 POTEB3A0JP26 581 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 IL9P15248 144 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 POTEBQ6S5H4 581 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 HERC6Q8IVU3 1022 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 TEX13BQ9BXU2 312 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 GPR108Q9NPR9 543 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
HMGXB4-206ENST00000466438 ZNF536O15090 1300 aa17.82■□□□□ 0.44
HMGXB4-206ENST00000466438 EVX2Q03828 476 aa17.82■□□□□ 0.44
HMGXB4-206ENST00000466438 TMED8Q6PL24 325 aaPredicted RBP17.82■□□□□ 0.44
HMGXB4-206ENST00000466438 DEFB128Q7Z7B8 93 aa17.82■□□□□ 0.44
HMGXB4-206ENST00000466438 PHOX2BQ99453 314 aa17.82■□□□□ 0.44
HMGXB4-206ENST00000466438 MCM3APO60318 1980 aa17.82■□□□□ 0.44
HMGXB4-206ENST00000466438 ASTN1O14525 1302 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 GNAI3P08754 354 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 KCNA5P22460 613 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 TNNI3KQ59H18 835 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 PTCRAQ6ISU1 281 aaPredicted RBP17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 ARMCX2Q7L311 632 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 SPRED2Q7Z698 418 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 FGD4Q96M96 766 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 KATNBL1Q9H079 304 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 SWAP70Q9UH65 585 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 FPGT-TNNI3KV9GXZ4 949 aa17.81■□□□□ 0.44
HMGXB4-206ENST00000466438 CFAP54Q96N23 3096 aa17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 FSCN1Q16658 493 aaKnown RBP17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 HFE2Q6ZVN8 426 aa17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 TLK2Q86UE8 772 aa17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 MFSD14AQ96MC6 490 aa17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 RIOK1Q9BRS2 568 aaKnown RBP17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 ALDH8A1Q9H2A2 487 aaPredicted RBP17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 RIPK3Q9Y572 518 aa17.8■□□□□ 0.44
HMGXB4-206ENST00000466438 GRXCR2A6NFK2 248 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 ZEB2O60315 1214 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 AKR1B1P15121 316 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 RFC2P35250 354 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 PUS10Q3MIT2 529 aaKnown RBP17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 CCDC144CPQ8IYA2 1237 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 API5Q9BZZ5 524 aaKnown RBP17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 GNEQ9Y223 722 aaKnown RBP17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 SCN5AQ14524 2016 aa17.79■□□□□ 0.44
HMGXB4-206ENST00000466438 MYH8P13535 1937 aa17.78■□□□□ 0.44
HMGXB4-206ENST00000466438 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.78■□□□□ 0.44
HMGXB4-206ENST00000466438 PSMC6P62333 389 aa17.78■□□□□ 0.44
HMGXB4-206ENST00000466438 FAM83BQ5T0W9 1011 aa17.78■□□□□ 0.44
HMGXB4-206ENST00000466438 GOPCQ9HD26 462 aa17.78■□□□□ 0.44
HMGXB4-206ENST00000466438 CYP2C9P11712 490 aa17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 ANKS1AQ92625 1134 aa17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 CCDC17Q96LX7 622 aa17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 CRNKL1Q9BZJ0 848 aaKnown RBP17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 AP5M1Q9H0R1 490 aa17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.44
HMGXB4-206ENST00000466438 ZDBF2Q9HCK1 2354 aa17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 MAGEB6P1A0A0J9YX57 407 aa17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 PNMA6EA0A0J9YXQ4 647 aa17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 ATP2A1O14983 1001 aa17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 EEF2P13639 858 aaKnown RBP17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 SLF1Q9BQI6 1058 aa17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 TRMT13Q9NUP7 481 aaKnown RBP17.76■□□□□ 0.43
HMGXB4-206ENST00000466438 TNKSO95271 1327 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 LCHNA4D1U4 455 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 CYP2D6P10635 497 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 PTPN5P54829 565 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 PRSS33Q8NF86 280 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 FTOQ9C0B1 505 aaKnown RBP eCLIP17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 SUGCTQ9HAC7 445 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 FBXO40Q9UH90 709 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 TANC1Q9C0D5 1861 aa17.75■□□□□ 0.43
HMGXB4-206ENST00000466438 E9PSI1 815 aa17.74■□□□□ 0.43
HMGXB4-206ENST00000466438 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms