RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 NGEFQ8N5V2 710 aa7.75□□□□□ -1.17
NCL-208ENST00000466274 SH3TC2Q8TF17 1288 aa7.75□□□□□ -1.17
NCL-208ENST00000466274 CLP1Q92989 425 aaKnown RBP7.75□□□□□ -1.17
NCL-208ENST00000466274 UBL7Q96S82 380 aaPredicted RBP7.75□□□□□ -1.17
NCL-208ENST00000466274 ZFYVE28Q9HCC9 887 aa7.75□□□□□ -1.17
NCL-208ENST00000466274 ANGEL1Q9UNK9 670 aaKnown RBP7.75□□□□□ -1.17
NCL-208ENST00000466274 RANBP2P49792 3224 aaKnown RBP7.75□□□□□ -1.17
NCL-208ENST00000466274 SMNDC1O75940 238 aaKnown RBP eCLIP7.74□□□□□ -1.172e-89■■■■■ 27.9
NCL-208ENST00000466274 GJB1P08034 283 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 CDC27P30260 824 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 PRKG1Q13976 671 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.74□□□□□ -1.17
NCL-208ENST00000466274 ZNF34Q8IZ26 560 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 WNK4Q96J92 1243 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 SH2B1Q9NRF2 756 aaPredicted RBP7.74□□□□□ -1.17
NCL-208ENST00000466274 ABI2Q9NYB9 513 aaPredicted RBP7.74□□□□□ -1.17
NCL-208ENST00000466274 SEPT3Q9UH03 358 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 HTTP42858 3142 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 UBN2Q6ZU65 1347 aa7.74□□□□□ -1.17
NCL-208ENST00000466274 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 KIAA0100Q14667 2235 aaKnown RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 TM4SF5O14894 197 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 HOXD10P28358 340 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 SSTR4P31391 388 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 CD68P34810 354 aaPredicted RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 UBXN2AP68543 259 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 UBE2Q1Q7Z7E8 422 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 ATCAYQ86WG3 371 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 APOBEC3FQ8IUX4 373 aaKnown RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 RTF1Q92541 710 aaKnown RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 KCNQ5Q9NR82 932 aa7.73□□□□□ -1.17
NCL-208ENST00000466274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
NCL-208ENST00000466274 KIF4AO95239 1232 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 MAP3K11Q16584 847 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 FAM109BQ6ICB4 259 aaPredicted RBP7.72□□□□□ -1.17
NCL-208ENST00000466274 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 NCAPG2Q86XI2 1143 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 TDHQ8IZJ6 230 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 CEP120Q8N960 986 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 SHISA4Q96DD7 197 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
NCL-208ENST00000466274 PBX4Q9BYU1 374 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 RNF208Q9H0X6 261 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 ELP3Q9H9T3 547 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 PCMTD2Q9NV79 361 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 TMEM63CQ9P1W3 806 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 CNTN3Q9P232 1028 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 POLLQ9UGP5 575 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 RAXQ9Y2V3 346 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 CEP290O15078 2479 aa7.72□□□□□ -1.17
NCL-208ENST00000466274 CEMIPQ8WUJ3 1361 aa7.71□□□□□ -1.17
NCL-208ENST00000466274 RBBP6Q7Z6E9 1792 aaKnown RBP7.71□□□□□ -1.17
NCL-208ENST00000466274 FSCN2O14926 492 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 DDX3YO15523 660 aaKnown RBP7.71□□□□□ -1.18
NCL-208ENST00000466274 EPHA1P21709 976 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 TAF1CQ15572 869 aaPredicted RBP7.71□□□□□ -1.18
NCL-208ENST00000466274 SUPT20HL1Q3ZLR7 823 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 TBC1D16Q8TBP0 767 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 RAET1EQ8TD07 263 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 GDF15Q99988 308 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 STOML1Q9UBI4 398 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 BIN2Q9UBW5 565 aaPredicted RBP7.71□□□□□ -1.18
NCL-208ENST00000466274 SCAF8Q9UPN6 1271 aaKnown RBP7.71□□□□□ -1.18
NCL-208ENST00000466274 RRP7AQ9Y3A4 280 aaKnown RBP7.71□□□□□ -1.18
NCL-208ENST00000466274 UBR2Q8IWV8 1755 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 BRCA2P51587 3418 aa7.71□□□□□ -1.18
NCL-208ENST00000466274 CCL5P13501 91 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 HCLS1P14317 486 aaPredicted RBP7.7□□□□□ -1.18
NCL-208ENST00000466274 ATP2B4P23634 1241 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 GRK4P32298 578 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 GPSM2P81274 684 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 HSP90AB3PQ58FF7 597 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 TTLL7Q6ZT98 887 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 KIAA1211Q6ZU35 1233 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 ARMC10Q8N2F6 343 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 GMLQ99445 158 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 PANK3Q9H999 370 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 PPP2R3BQ9Y5P8 575 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 SH3TC1Q8TE82 1336 aa7.7□□□□□ -1.18
NCL-208ENST00000466274 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 WNT10BO00744 389 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 MED26O95402 600 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 TFRCP02786 760 aaKnown RBP7.69□□□□□ -1.18
NCL-208ENST00000466274 MYL6BP14649 208 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 GTF2A2P52657 109 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 LACTBP83111 547 aaPredicted RBP7.69□□□□□ -1.18
NCL-208ENST00000466274 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 ZNF438Q7Z4V0 828 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 ANKRD13AQ8IZ07 590 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 U2AF1L4Q8WU68 220 aaKnown RBP7.69□□□□□ -1.18
NCL-208ENST00000466274 PBXIP1Q96AQ6 731 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 KLHDC7BQ96G42 594 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 PTPN18Q99952 460 aa7.69□□□□□ -1.18
NCL-208ENST00000466274 TRMT112Q9UI30 125 aaKnown RBP7.69□□□□□ -1.18
NCL-208ENST00000466274 KNSTRNQ9Y448 316 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms