RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MTMR8Q96EF0 704 aa21.33■■□□□ 1
CAPN3-209ENST00000466222 PRR12Q9ULL5 1215 aa21.33■■□□□ 1
CAPN3-209ENST00000466222 ZBTB5O15062 677 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 CCDC192P0DO97 292 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 XBP1P17861 261 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 VCAM1P19320 739 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 U2AF2P26368 475 aaKnown RBP eCLIP21.32■■□□□ 1
CAPN3-209ENST00000466222 STAT2P52630 851 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 GNL2Q13823 731 aaKnown RBP21.32■■□□□ 1
CAPN3-209ENST00000466222 QRICH1Q2TAL8 776 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 CSADQ9Y600 493 aa21.32■■□□□ 1
CAPN3-209ENST00000466222 BAZ2BQ9UIF8 2168 aaKnown RBP21.32■■□□□ 1
CAPN3-209ENST00000466222 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
CAPN3-209ENST00000466222 PNMA6FA0A0J9YX94 578 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 CDC37Q16543 378 aaPredicted RBP21.31■■□□□ 1
CAPN3-209ENST00000466222 BTNL9Q6UXG8 535 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 RASGRP4Q8TDF6 673 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 SCN4AP35499 1836 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 TPM3P06753 285 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 NAPAP54920 295 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 AS3MTQ9HBK9 375 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 USP25Q9UHP3 1055 aa21.31■■□□□ 1
CAPN3-209ENST00000466222 ADCY5O95622 1261 aa21.3■■□□□ 1
CAPN3-209ENST00000466222 SAFBQ15424 915 aaKnown RBP eCLIP21.3■■□□□ 1
CAPN3-209ENST00000466222 NOSTRINQ8IVI9 506 aa21.3■■□□□ 1
CAPN3-209ENST00000466222 ANKRD13AQ8IZ07 590 aa21.3■■□□□ 1
CAPN3-209ENST00000466222 OTUD5Q96G74 571 aa21.3■■□□□ 1
CAPN3-209ENST00000466222 USP28Q96RU2 1077 aa21.3■■□□□ 1
CAPN3-209ENST00000466222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.3■■□□□ 1
CAPN3-209ENST00000466222 IRF6O14896 467 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 KRT2P35908 639 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 MYSM1Q5VVJ2 828 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 RPAP3Q9H6T3 665 aaPredicted RBP21.29■■□□□ 1
CAPN3-209ENST00000466222 DDX19AQ9NUU7 478 aaKnown RBP21.29■■□□□ 1
CAPN3-209ENST00000466222 HSP90AA2PQ14568 343 aaPredicted RBP21.29■■□□□ 1
CAPN3-209ENST00000466222 MAP3K11Q16584 847 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 LPAR1Q92633 364 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 TANGO6Q9C0B7 1094 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 NUP62CLQ9H1M0 184 aa21.29■■□□□ 1
CAPN3-209ENST00000466222 FOXP1Q9H334 677 aaPredicted RBP21.29■■□□□ 1
CAPN3-209ENST00000466222 SMCO2A6NFE2 343 aa21.28■■□□□ 1
CAPN3-209ENST00000466222 USH1GQ495M9 461 aa21.28■■□□□ 1
CAPN3-209ENST00000466222 RGS22Q8NE09 1264 aa21.28■■□□□ 1
CAPN3-209ENST00000466222 TNFRSF25Q93038 417 aa21.28■■□□□ 1
CAPN3-209ENST00000466222 SH3GLB2Q9NR46 395 aa21.28■■□□□ 1
CAPN3-209ENST00000466222 CLIC4Q9Y696 253 aa21.28■■□□□ 1
CAPN3-209ENST00000466222 WDR46O15213 610 aaKnown RBP21.27■■□□□ 1
CAPN3-209ENST00000466222 CELF2O95319 508 aaKnown RBP21.27■■□□□ 1
CAPN3-209ENST00000466222 CCDC174Q6PII3 467 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 ARMC9Q7Z3E5 817 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 BRAPQ7Z569 592 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 R3HCC1Q9Y3T6 440 aaKnown RBP21.27■■□□□ 1
CAPN3-209ENST00000466222 GOLGA6L4A6NEF3 574 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 WNT7AO00755 349 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 ITGBL1O95965 494 aaPredicted RBP21.27■■□□□ 1
CAPN3-209ENST00000466222 TOB1P50616 345 aaPredicted RBP21.27■■□□□ 1
CAPN3-209ENST00000466222 USP14P54578 494 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 LDLRAD1Q5T700 205 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 BLIDQ8IZY5 108 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 WNK4Q96J92 1243 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 SPATA32Q96LK8 384 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 ZMYND12Q9H0C1 365 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 FEM1BQ9UK73 627 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 PCDHA4Q9UN74 947 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 PCDHA1Q9Y5I3 950 aa21.27■■□□□ 1
CAPN3-209ENST00000466222 MYH4Q9Y623 1939 aa21.26■□□□□ 0.99
CAPN3-209ENST00000466222 ATP2B1P20020 1258 aa21.26■□□□□ 0.99
CAPN3-209ENST00000466222 CST9Q5W186 159 aa21.26■□□□□ 0.99
CAPN3-209ENST00000466222 SASS6Q6UVJ0 657 aa21.26■□□□□ 0.99
CAPN3-209ENST00000466222 CHURC1Q8WUH1 139 aa21.26■□□□□ 0.99
CAPN3-209ENST00000466222 OPTNQ96CV9 577 aa21.26■□□□□ 0.99
CAPN3-209ENST00000466222 M0R2N6 131 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 FLOT1O75955 427 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 GJA5P36382 358 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 PIK3AP1Q6ZUJ8 805 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 FAM200AQ8TCP9 573 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 LEO1Q8WVC0 666 aaPredicted RBP21.25■□□□□ 0.99
CAPN3-209ENST00000466222 PCDHA6Q9UN73 950 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 PCDHA8Q9Y5H6 950 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 TREML2Q5T2D2 321 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 ERO1BQ86YB8 467 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 CCDC148Q8NFR7 591 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 TMEM260Q9NX78 707 aa21.25■□□□□ 0.99
CAPN3-209ENST00000466222 BIN2Q9UBW5 565 aaPredicted RBP21.25■□□□□ 0.99
CAPN3-209ENST00000466222 SPDYE5A6NIY4 337 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 C19orf81C9J6K1 198 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 PPATQ06203 517 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 RBM43Q6ZSC3 357 aaKnown RBP21.24■□□□□ 0.99
CAPN3-209ENST00000466222 FAM160B2Q86V87 743 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 FBXO11Q86XK2 927 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 SLF1Q9BQI6 1058 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 RANBP17Q9H2T7 1088 aaKnown RBP21.24■□□□□ 0.99
CAPN3-209ENST00000466222 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
CAPN3-209ENST00000466222 GOLGA6L6A8MZA4 724 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 PLA2G6O60733 806 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 CALML3P27482 149 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 UBE2SQ16763 222 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 CHADLQ6NUI6 762 aa21.23■□□□□ 0.99
CAPN3-209ENST00000466222 PRPF38AQ8NAV1 312 aaKnown RBP21.23■□□□□ 0.99
CAPN3-209ENST00000466222 PGBD1Q96JS3 809 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms