RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FAM151AQ8WW52 585 aa20.77■□□□□ 0.92
COL9A3-205ENST00000466192 PKNOX2Q96KN3 472 aa20.77■□□□□ 0.92
COL9A3-205ENST00000466192 HOOK1Q9UJC3 728 aaKnown RBP20.77■□□□□ 0.92
COL9A3-205ENST00000466192 PNMA6FA0A0J9YX94 578 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 NFKBIEO00221 500 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 PPP1R11O60927 126 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-205ENST00000466192 OFD1O75665 1012 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 PRR29P0C7W0 189 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 ARL6IP4Q66PJ3 421 aaKnown RBP20.76■□□□□ 0.91
COL9A3-205ENST00000466192 KRT25Q7Z3Z0 450 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 GRAMD1CQ8IYS0 662 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 MTMR14Q8NCE2 650 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 DHX58Q96C10 678 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 UTRNP46939 3433 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 RAD21O60216 631 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 GH2P01242 217 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 SLFN13Q68D06 897 aa20.76■□□□□ 0.91
COL9A3-205ENST00000466192 C17orf53Q8N3J3 647 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-205ENST00000466192 HERC5Q9UII4 1024 aaKnown RBP20.76■□□□□ 0.91
COL9A3-205ENST00000466192 NONOQ15233 471 aaKnown RBP eCLIP20.75■□□□□ 0.91
COL9A3-205ENST00000466192 RBM26Q5T8P6 1007 aaKnown RBP20.75■□□□□ 0.91
COL9A3-205ENST00000466192 REXO1Q8N1G1 1221 aaKnown RBP20.75■□□□□ 0.91
COL9A3-205ENST00000466192 DCAF4Q8WV16 495 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 MTMR8Q96EF0 704 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 MRFAP1L1Q96HT8 127 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 TMEM60Q9H2L4 133 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.75■□□□□ 0.91
COL9A3-205ENST00000466192 VEZTQ9HBM0 779 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 BIN2Q9UBW5 565 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-205ENST00000466192 CDC25BP30305 580 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 SLC1A4P43007 532 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 HSP90AA2PQ14568 343 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-205ENST00000466192 CIAPIN1Q6FI81 312 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 KANK3Q6NY19 840 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 TMEM260Q9NX78 707 aa20.75■□□□□ 0.91
COL9A3-205ENST00000466192 NCAPHQ15003 741 aa20.74■□□□□ 0.91
COL9A3-205ENST00000466192 JAKMIP3Q5VZ66 844 aa20.74■□□□□ 0.91
COL9A3-205ENST00000466192 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.74■□□□□ 0.91
COL9A3-205ENST00000466192 JDP2Q8WYK2 163 aa20.74■□□□□ 0.91
COL9A3-205ENST00000466192 ZBED3Q96IU2 234 aaPredicted RBP20.74■□□□□ 0.91
COL9A3-205ENST00000466192 SHTN1A0MZ66 631 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 F5H6K3 240 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 ZBTB5O15062 677 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 BMP6P22004 513 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 KLRC3Q07444 240 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 NT5DC1Q5TFE4 455 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 CDAN1Q8IWY9 1227 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 PYCARDQ9ULZ3 195 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 SMTNL1A8MU46 457 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 SARSP49591 514 aaKnown RBP20.73■□□□□ 0.91
COL9A3-205ENST00000466192 ADCY7P51828 1080 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 CCDC144BQ3MJ40 725 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 FKBP1CQ5VVH2 108 aa20.73■□□□□ 0.91
COL9A3-205ENST00000466192 LONP1P36776 959 aaKnown RBP20.72■□□□□ 0.91
COL9A3-205ENST00000466192 LETM2Q2VYF4 491 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 NBPF9Q3BBW0 867 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 PPP1R18Q6NYC8 613 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 SH3RF1Q7Z6J0 888 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 NEK8Q86SG6 692 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 GMCL1P1Q8NEA9 526 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 TBCKQ8TEA7 893 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 TMEM39BQ9GZU3 492 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 MAN1B1Q9UKM7 699 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 BCS1LQ9Y276 419 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 WNT10BO00744 389 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 TPM4P67936 248 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 LRMPQ12912 555 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 NOLC1Q14978 699 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL9A3-205ENST00000466192 E2F4Q16254 413 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
COL9A3-205ENST00000466192 A0A1W2PRG0 241 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 IKBKBO14920 756 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 CCNT1O60563 726 aaKnown RBP20.71■□□□□ 0.91
COL9A3-205ENST00000466192 NDUFB10O96000 172 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 LMOD1P29536 600 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-205ENST00000466192 DTHD1Q6ZMT9 781 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 SPATA20Q8TB22 786 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 SMARCE1Q969G3 411 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 PAGE5Q96GU1 130 aa20.71■□□□□ 0.91
COL9A3-205ENST00000466192 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-205ENST00000466192 CDC25AP30304 524 aa20.7■□□□□ 0.91
COL9A3-205ENST00000466192 KIAA1524Q8TCG1 905 aa20.7■□□□□ 0.91
COL9A3-205ENST00000466192 GMCL1Q96IK5 515 aa20.7■□□□□ 0.91
COL9A3-205ENST00000466192 MYOZ2Q9NPC6 264 aa20.7■□□□□ 0.91
COL9A3-205ENST00000466192 RIC8AQ9NPQ8 531 aa20.7■□□□□ 0.91
COL9A3-205ENST00000466192 LAD1O00515 517 aa20.7■□□□□ 0.9
COL9A3-205ENST00000466192 AFMP43652 599 aa20.7■□□□□ 0.9
COL9A3-205ENST00000466192 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
COL9A3-205ENST00000466192 FAM83AQ86UY5 434 aa20.7■□□□□ 0.9
COL9A3-205ENST00000466192 MYO1BO43795 1136 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 PRPHP41219 470 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 MYL5Q02045 173 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 TNIP1Q15025 636 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 HSD3B7Q9H2F3 369 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 IFNKQ9P0W0 207 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 PGAP2Q9UHJ9 254 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms