RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 TJP2Q9UDY2 1190 aa8.89□□□□□ -0.99
SPTA1-203ENST00000465741 ADGRL3Q9HAR2 1447 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 SMAD7O15105 426 aaKnown RBP8.88□□□□□ -0.99
SPTA1-203ENST00000465741 H2AFB1P0C5Y9 115 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 H2AFB2P0C5Z0 115 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 GUCY2CP25092 1073 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 PPP2R1AP30153 589 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 LRP8Q14114 963 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 MAP7Q14244 749 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 CDCP2Q5VXM1 449 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 NLRC3Q7RTR2 1065 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 NME9Q86XW9 330 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 SLFN12Q8IYM2 578 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 MYRFLQ96LU7 910 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 UBL7Q96S82 380 aaPredicted RBP8.88□□□□□ -0.99
SPTA1-203ENST00000465741 ACTR10Q9NZ32 417 aa8.88□□□□□ -0.99
SPTA1-203ENST00000465741 NPC1L1Q9UHC9 1359 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 MYBBP1AQ9BQG0 1328 aaKnown RBP8.87□□□□□ -0.99
SPTA1-203ENST00000465741 HYAL3O43820 417 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-203ENST00000465741 NME1P15531 152 aaKnown RBP8.87□□□□□ -0.99
SPTA1-203ENST00000465741 RAG1P15918 1043 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 CASP7P55210 303 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 INTS3Q68E01 1043 aaKnown RBP8.87□□□□□ -0.99
SPTA1-203ENST00000465741 NBPF11Q86T75 865 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 EZH1Q92800 747 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-203ENST00000465741 ATG4CQ96DT6 458 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 LNPKQ9C0E8 428 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 ANTXR1Q9H6X2 564 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 CNNM2Q9H8M5 875 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 FBRSQ9HAH7 460 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 DAGLAQ9Y4D2 1042 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 ARHGEF28Q8N1W1 1705 aaKnown RBP8.87□□□□□ -0.99
SPTA1-203ENST00000465741 NCOA3Q9Y6Q9 1424 aa8.87□□□□□ -0.99
SPTA1-203ENST00000465741 MSH6P52701 1360 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 QRICH2Q9H0J4 1663 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 TNFRSF10CO14798 259 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 LRIG2O94898 1065 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 BMP3P12645 472 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 RXRBP28702 533 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 HSPA1LP34931 641 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 RAB33AQ14088 237 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 PPP2R5EQ16537 467 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 ARSHQ5FYA8 562 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 PHACTR4Q8IZ21 702 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 FAM169BQ8N8A8 192 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 MFSD2AQ8NA29 543 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 HNRNPLLQ8WVV9 542 aaKnown RBP8.86□□□□□ -0.99
SPTA1-203ENST00000465741 MEGF10Q96KG7 1140 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 YTHDC1Q96MU7 727 aaKnown RBP8.86□□□□□ -0.99
SPTA1-203ENST00000465741 OSBPL2Q9H1P3 480 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 CPSF1Q10570 1443 aaKnown RBP8.86□□□□□ -0.99
SPTA1-203ENST00000465741 ANKARQ7Z5J8 1434 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 PARD3Q8TEW0 1356 aa8.86□□□□□ -0.99
SPTA1-203ENST00000465741 NKTRP30414 1462 aaKnown RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 CD163L1Q9NR16 1453 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 CHURC1-FNTBB4DL54 471 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 DHX15O43143 795 aaKnown RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 KLF4O43474 513 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 DNAJA2O60884 412 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 CST3P01034 146 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 FBLN1P23142 703 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 MAP4P27816 1152 aaKnown RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 CCNFP41002 786 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 SLBPQ14493 270 aaKnown RBP eCLIP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 SGO2Q562F6 1265 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 KRT28Q7Z3Y7 464 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 DDX17Q92841 729 aaKnown RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 COG3Q96JB2 828 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 FOXQ1Q9C009 403 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 SEMA6CQ9H3T2 930 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 SIRPGQ9P1W8 387 aa8.85□□□□□ -0.99
SPTA1-203ENST00000465741 XRN1Q8IZH2 1706 aaKnown RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-203ENST00000465741 ATP7BP35670 1465 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 MTHFSP49914 203 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 NKG7Q16617 165 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 PRAMEF13Q5VWM6 474 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 ARMCX6Q7L4S7 300 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 FAM20CQ8IXL6 584 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 FAM9BQ8IZU0 186 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 FBLIM1Q8WUP2 373 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 CCDC74BQ96LY2 380 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 SSBP4Q9BWG4 385 aaPredicted RBP8.84□□□□□ -0.99
SPTA1-203ENST00000465741 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 LRRC7Q96NW7 1537 aa8.84□□□□□ -0.99
SPTA1-203ENST00000465741 POLR3AO14802 1390 aaPredicted RBP8.84□□□□□ -0.99
SPTA1-203ENST00000465741 STRCP1A6NGW2 1772 aa8.84□□□□□ -1
SPTA1-203ENST00000465741 C1orf167Q5SNV9 1468 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 FAM95CA0A1B0GW59 222 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 UPK3BL1B0FP48 263 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 UPK3BL2E5RIL1 263 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 NFICP08651 508 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 CHMP4BP1P59074 171 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 NFE2L2Q16236 605 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 FXNQ16595 210 aa8.83□□□□□ -1
SPTA1-203ENST00000465741 PAOXQ6QHF9 649 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms