RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 DYMQ7RTS9 669 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 ZNF227Q86WZ6 799 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 DHRS1Q96LJ7 313 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 KLHL25Q9H0H3 589 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 MYO5BQ9ULV0 1848 aa6.14□□□□□ -1.43
CDK13-203ENST00000465643 SPATA31E1Q6ZUB1 1445 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 NUTM2GQ5VZR2 741 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 HEATR6Q6AI08 1181 aaKnown RBP6.13□□□□□ -1.43
CDK13-203ENST00000465643 LYPD4Q6UWN0 246 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 ACAD11Q709F0 780 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 CCDC144CPQ8IYA2 1237 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 PPP1R13LQ8WUF5 828 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 SGSM3Q96HU1 749 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 FAM105AQ9NUU6 356 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 ZNF451Q9Y4E5 1061 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 SHOXO15266 292 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 S100BP04271 92 aaPredicted RBP6.13□□□□□ -1.43
CDK13-203ENST00000465643 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDK13-203ENST00000465643 BBS9Q3SYG4 887 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 HP1BP3Q5SSJ5 553 aaPredicted RBP6.13□□□□□ -1.43
CDK13-203ENST00000465643 FERMT3Q86UX7 667 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 MAP4K3Q8IVH8 894 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 RAVER1Q8IY67 606 aaKnown RBP6.13□□□□□ -1.43
CDK13-203ENST00000465643 ADCY4Q8NFM4 1077 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 APBA2Q99767 749 aa6.13□□□□□ -1.43
CDK13-203ENST00000465643 KDM5AP29375 1690 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 A0A0A0MRY4 1105 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 TRBV23-1A0A0A0MS06 115 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 TRAV20A0A0B4J274 112 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 AGRPO00253 132 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 KCNQ2O43526 872 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 LTKP29376 864 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 DGKGP49619 791 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 SF1Q15637 639 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 CDC37L1Q7L3B6 337 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 ADAT2Q7Z6V5 191 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 RNF180Q86T96 592 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 DDX42Q86XP3 938 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDK13-203ENST00000465643 NPAS3Q8IXF0 933 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 FMR1NBQ8N0W7 255 aaPredicted RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 AGGF1Q8N302 714 aaeCLIP6.12□□□□□ -1.43
CDK13-203ENST00000465643 RIN3Q8TB24 985 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 CYB5D2Q8WUJ1 264 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 CHAC2Q8WUX2 184 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 AARSD1Q9BTE6 412 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 TARS2Q9BW92 718 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 MKRN2Q9H000 416 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 CHPF2Q9P2E5 772 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 ACTL7BQ9Y614 415 aa6.12□□□□□ -1.43
CDK13-203ENST00000465643 SCAF11Q99590 1463 aaKnown RBP6.12□□□□□ -1.43
CDK13-203ENST00000465643 PRODHO43272 600 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 BCRP11274 1271 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 SOX4Q06945 474 aaPredicted RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 CNNM4Q6P4Q7 775 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 ATXN3LQ9H3M9 355 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 LGR6Q9HBX8 967 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 SLIT1O75093 1534 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 NEXMIFQ5QGS0 1516 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 ARHGAP23Q9P227 1491 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 ADGRF5Q8IZF2 1346 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 SYNGAP1Q96PV0 1343 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 ZFYVE9O95405 1425 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 BLACEA4D250 179 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 FAM83GA6ND36 823 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 TERTO14746 1132 aaKnown RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 CST3P01034 146 aaPredicted RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 ASPAP45381 313 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 HSP90AA2PQ14568 343 aaPredicted RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 FBXO11Q86XK2 927 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 JDP2Q8WYK2 163 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 TRIM11Q96F44 468 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 SSU72Q9NP77 194 aaKnown RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 HOMER2Q9NSB8 354 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 THRAP3Q9Y2W1 955 aaKnown RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 SUGT1Q9Y2Z0 365 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 NEURL4Q96JN8 1562 aa6.11□□□□□ -1.43
CDK13-203ENST00000465643 NPHP4O75161 1426 aaPredicted RBP6.11□□□□□ -1.43
CDK13-203ENST00000465643 GSG1L2A8MUP6 293 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 PLD2O14939 933 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 CELA2BP08218 269 aaPredicted RBP6.1□□□□□ -1.43
CDK13-203ENST00000465643 PABPC1P11940 636 aaKnown RBP6.1□□□□□ -1.43
CDK13-203ENST00000465643 NFKB2Q00653 900 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 ODR4Q5SWX8 454 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 STRA8Q7Z7C7 330 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 BRF1Q92994 677 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 SPDYE3A6NKU9 549 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 CAPNS1P04632 268 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 SLURP2P0DP57 97 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 ZNF143P52747 638 aaPredicted RBP6.1□□□□□ -1.43
CDK13-203ENST00000465643 BRDTQ58F21 947 aaPredicted RBP6.1□□□□□ -1.43
CDK13-203ENST00000465643 ARMCX6Q7L4S7 300 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 C2CD4AQ8NCU7 369 aaPredicted RBP6.1□□□□□ -1.43
CDK13-203ENST00000465643 BTN2A2Q8WVV5 523 aa6.1□□□□□ -1.43
CDK13-203ENST00000465643 CAAP1Q9H8G2 361 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms