RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 EPHB3P54753 998 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 TDRD10Q5VZ19 366 aaKnown RBP8.91□□□□□ -0.98
SMC4-205ENST00000465563 FBXW10Q5XX13 1052 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 NUP43Q8NFH3 380 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 ZCCHC4Q9H5U6 513 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 KLHL14Q9P2G3 628 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 ACSL6Q9UKU0 697 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 PCDHGB7Q9Y5F8 929 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 HOXA5P20719 270 aa8.9□□□□□ -0.98
SMC4-205ENST00000465563 CEBPAP49715 358 aaPredicted RBP8.9□□□□□ -0.98
SMC4-205ENST00000465563 CTSWP56202 376 aa8.9□□□□□ -0.98
SMC4-205ENST00000465563 ANKRD39Q53RE8 183 aa8.9□□□□□ -0.98
SMC4-205ENST00000465563 RTP2Q5QGT7 225 aa8.9□□□□□ -0.98
SMC4-205ENST00000465563 NOL9Q5SY16 702 aaKnown RBP8.9□□□□□ -0.98
SMC4-205ENST00000465563 NAT16Q8N8M0 369 aa8.9□□□□□ -0.98
SMC4-205ENST00000465563 GSTM1P09488 218 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 RAB3GAP1Q15042 981 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 DCAF15Q66K64 600 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 RBBP8NLQ8NC74 664 aaPredicted RBP8.89□□□□□ -0.99
SMC4-205ENST00000465563 TMEM52Q8NDY8 209 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 PANK1Q8TE04 598 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 MZB1Q8WU39 189 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 RNF34Q969K3 372 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 JMJD8Q96S16 334 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 SLC12A9Q9BXP2 914 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 IMPACTQ9P2X3 320 aa8.89□□□□□ -0.99
SMC4-205ENST00000465563 GUCY2CP25092 1073 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 CDR1P51861 262 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 AXDND1Q5T1B0 1012 aaPredicted RBP8.88□□□□□ -0.99
SMC4-205ENST00000465563 UNC5AQ6ZN44 842 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 PPFIBP1Q86W92 1011 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 GP6Q9HCN6 339 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 TNFRSF12AQ9NP84 129 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 PPT2Q9UMR5 302 aa8.88□□□□□ -0.99
SMC4-205ENST00000465563 A0A1W2PQ27 194 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 A0A1W2PQ64 194 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 A0A1W2PQC6 194 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 A0A1W2PQD8 194 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 NUDT19A8MXV4 375 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 B8ZZF3 427 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 PRRG2O14669 202 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 TP53P04637 393 aaPredicted RBP8.87□□□□□ -0.99
SMC4-205ENST00000465563 ZNF445P59923 1031 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 HLA-DQA1Q5Y7H0 255 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 BRF1Q92994 677 aa8.87□□□□□ -0.99
SMC4-205ENST00000465563 DACT3Q96B18 629 aaPredicted RBP8.87□□□□□ -0.99
SMC4-205ENST00000465563 NCANO14594 1321 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 H0Y8X5 98 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 IRS4O14654 1257 aaPredicted RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 NOP2P46087 812 aaKnown RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 AFF3P51826 1226 aaKnown RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 CBX2Q14781 532 aaPredicted RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 ZYXQ15942 572 aaKnown RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 RUFY4Q6ZNE9 571 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 LDHDQ86WU2 507 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 MARCH10Q8NA82 808 aaPredicted RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 KCNC2Q96PR1 638 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 DDX41Q9UJV9 622 aaKnown RBP8.86□□□□□ -0.99
SMC4-205ENST00000465563 FHOD1Q9Y613 1164 aa8.86□□□□□ -0.99
SMC4-205ENST00000465563 CD247P20963 164 aa8.85□□□□□ -0.99
SMC4-205ENST00000465563 RACK1P63244 317 aaKnown RBP8.85□□□□□ -0.99
SMC4-205ENST00000465563 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
SMC4-205ENST00000465563 EPB41L4AQ9HCS5 686 aaPredicted RBP8.85□□□□□ -0.99
SMC4-205ENST00000465563 FAM86C1Q9NVL1 165 aa8.85□□□□□ -0.99
SMC4-205ENST00000465563 ZNF214Q9UL59 606 aaPredicted RBP8.85□□□□□ -0.99
SMC4-205ENST00000465563 SF3B6Q9Y3B4 125 aaKnown RBP8.85□□□□□ -0.99
SMC4-205ENST00000465563 TRIM13O60858 407 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 MVKQ03426 396 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 COL9A2Q14055 689 aaPredicted RBP8.84□□□□□ -0.99
SMC4-205ENST00000465563 CNKSR3Q6P9H4 555 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 CYP2R1Q6VVX0 501 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 RPTNQ6XPR3 784 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 LSRQ86X29 649 aaPredicted RBP8.84□□□□□ -0.99
SMC4-205ENST00000465563 FIBCD1Q8N539 461 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 ZNF451Q9Y4E5 1061 aa8.84□□□□□ -0.99
SMC4-205ENST00000465563 FGF10O15520 208 aaPredicted RBP8.83□□□□□ -1
SMC4-205ENST00000465563 ITGA4P13612 1032 aa8.83□□□□□ -1
SMC4-205ENST00000465563 NR1I3Q14994 352 aa8.83□□□□□ -1
SMC4-205ENST00000465563 IGDCC3Q8IVU1 814 aa8.83□□□□□ -1
SMC4-205ENST00000465563 TMEFF1Q8IYR6 380 aa8.83□□□□□ -1
SMC4-205ENST00000465563 CRBNQ96SW2 442 aa8.83□□□□□ -1
SMC4-205ENST00000465563 MAPKAPK2P49137 400 aa8.82□□□□□ -1
SMC4-205ENST00000465563 POU4F1Q01851 419 aa8.82□□□□□ -1
SMC4-205ENST00000465563 TCEAL1Q15170 157 aa8.82□□□□□ -1
SMC4-205ENST00000465563 FAM129CQ86XR2 697 aa8.82□□□□□ -1
SMC4-205ENST00000465563 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
SMC4-205ENST00000465563 RELTQ969Z4 430 aa8.82□□□□□ -1
SMC4-205ENST00000465563 FCRL3Q96P31 734 aaPredicted RBP8.82□□□□□ -1
SMC4-205ENST00000465563 NOL6Q9H6R4 1146 aaKnown RBP8.82□□□□□ -1
SMC4-205ENST00000465563 PCDHA5Q9Y5H7 936 aa8.82□□□□□ -1
SMC4-205ENST00000465563 A0A087WZG4 1122 aa8.81□□□□□ -1
SMC4-205ENST00000465563 A0A1W2PQJ5 194 aa8.81□□□□□ -1
SMC4-205ENST00000465563 SCAMP3O14828 347 aaKnown RBP8.81□□□□□ -1
SMC4-205ENST00000465563 SASH1O94885 1247 aa8.81□□□□□ -1
SMC4-205ENST00000465563 MSL3P1P0C860 447 aa8.81□□□□□ -1
SMC4-205ENST00000465563 MFAP1P55081 439 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms