RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 FGRP09769 529 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 IKQ13123 557 aaPredicted RBP24.71■■□□□ 1.55
CSPG5-204ENST00000465441 MCMDC2Q4G0Z9 681 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 KCTD1Q719H9 257 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 KLHDC9Q8NEP7 349 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 TSEN34Q9BSV6 310 aaKnown RBP24.71■■□□□ 1.55
CSPG5-204ENST00000465441 HOMER2Q9NSB8 354 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 MTMR10Q9NXD2 777 aa24.71■■□□□ 1.55
CSPG5-204ENST00000465441 A0A1W2PQ45 241 aaPredicted RBP24.7■■□□□ 1.54
CSPG5-204ENST00000465441 A0A1W2PQY0 241 aa24.7■■□□□ 1.54
CSPG5-204ENST00000465441 NOVP48745 357 aa24.7■■□□□ 1.54
CSPG5-204ENST00000465441 LNPKQ9C0E8 428 aa24.7■■□□□ 1.54
CSPG5-204ENST00000465441 ABHD16BQ9H3Z7 469 aa24.7■■□□□ 1.54
CSPG5-204ENST00000465441 SYNRGQ9UMZ2 1314 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 A0A0D9SFI3 127 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 ORC4O43929 436 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 DUSP11O75319 330 aaKnown RBP24.69■■□□□ 1.54
CSPG5-204ENST00000465441 SNAP25P60880 206 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 CNTN2Q02246 1040 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 SHHQ15465 462 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 KCNA10Q16322 511 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 ACAD9Q9H845 621 aa24.69■■□□□ 1.54
CSPG5-204ENST00000465441 POTEB2H3BUK9 544 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 ACLYP53396 1101 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 IRX5P78411 483 aaPredicted RBP24.68■■□□□ 1.54
CSPG5-204ENST00000465441 CCSAPQ6IQ19 270 aaPredicted RBP24.68■■□□□ 1.54
CSPG5-204ENST00000465441 ARMCX2Q7L311 632 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 RASGRP2Q7LDG7 609 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 TICAM2Q86XR7 235 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 TRERF1Q96PN7 1200 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 RNF146Q9NTX7 359 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 PRR12Q9ULL5 1215 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 MTMR7Q9Y216 660 aa24.68■■□□□ 1.54
CSPG5-204ENST00000465441 MYADML2A6NDP7 307 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 TRIM6-TRIM34B2RNG4 842 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 ADCY6O43306 1168 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 HSPD1P10809 573 aaKnown RBP24.67■■□□□ 1.54
CSPG5-204ENST00000465441 ITGB8P26012 769 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 NMIQ13287 307 aaPredicted RBP24.67■■□□□ 1.54
CSPG5-204ENST00000465441 TKFCQ3LXA3 575 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 CCDC144BQ3MJ40 725 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 C9orf50Q5SZB4 431 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 B4GALNT3Q6L9W6 998 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 CCDC174Q6PII3 467 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 CCDC144CPQ8IYA2 1237 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 FAM133AQ8N9E0 248 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 SLC17A8Q8NDX2 589 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
CSPG5-204ENST00000465441 A1CFQ9NQ94 594 aaKnown RBP24.67■■□□□ 1.54
CSPG5-204ENST00000465441 STARD7Q9NQZ5 370 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 TOMM22Q9NS69 142 aa24.67■■□□□ 1.54
CSPG5-204ENST00000465441 SOWAHBA6NEL2 793 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 MOXD2PA6NHM9 499 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 CLTBP09497 229 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 ALAS1P13196 640 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 AAMPQ13685 434 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 RRP12Q5JTH9 1297 aaKnown RBP24.66■■□□□ 1.54
CSPG5-204ENST00000465441 ZNF589Q86UQ0 364 aaPredicted RBP24.66■■□□□ 1.54
CSPG5-204ENST00000465441 SMC5Q8IY18 1101 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 NUP133Q8WUM0 1156 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 RILPL2Q969X0 211 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 KATNBL1Q9H079 304 aa24.66■■□□□ 1.54
CSPG5-204ENST00000465441 LTBP2Q14767 1821 aa24.65■■□□□ 1.54
CSPG5-204ENST00000465441 PQBP1O60828 265 aaKnown RBP24.65■■□□□ 1.54
CSPG5-204ENST00000465441 RWDD1Q9H446 243 aaPredicted RBP24.65■■□□□ 1.54
CSPG5-204ENST00000465441 KIAA0355O15063 1070 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 IGHDP01880 384 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 C6orf222P0C671 652 aaPredicted RBP24.64■■□□□ 1.54
CSPG5-204ENST00000465441 GJA9P57773 515 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 TTBK2Q6IQ55 1244 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 DCAF4Q8WV16 495 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 TMEM47Q9BQJ4 181 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 TCP11L1Q9NUJ3 509 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 STXBP5LQ9Y2K9 1186 aa24.64■■□□□ 1.54
CSPG5-204ENST00000465441 CST5P28325 142 aaPredicted RBP24.63■■□□□ 1.53
CSPG5-204ENST00000465441 HAND2P61296 217 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 FAAP100Q0VG06 881 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 MUM1L1Q5H9M0 696 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 FAM109BQ6ICB4 259 aaPredicted RBP24.63■■□□□ 1.53
CSPG5-204ENST00000465441 ANKRD33Q7Z3H0 272 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 TOX2Q96NM4 488 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 UPF3AQ9H1J1 476 aaKnown RBP24.63■■□□□ 1.53
CSPG5-204ENST00000465441 SPC25Q9HBM1 224 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 TMEM39AQ9NV64 488 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 MCM3APO60318 1980 aa24.63■■□□□ 1.53
CSPG5-204ENST00000465441 ASGR1P07306 291 aa24.62■■□□□ 1.53
CSPG5-204ENST00000465441 TOP1P11387 765 aaKnown RBP24.62■■□□□ 1.53
CSPG5-204ENST00000465441 RAG1P15918 1043 aa24.62■■□□□ 1.53
CSPG5-204ENST00000465441 SLC16A2P36021 539 aa24.62■■□□□ 1.53
CSPG5-204ENST00000465441 CCDC96Q2M329 555 aa24.62■■□□□ 1.53
CSPG5-204ENST00000465441 BTNL9Q6UXG8 535 aa24.62■■□□□ 1.53
CSPG5-204ENST00000465441 PCSK9Q8NBP7 692 aaKnown RBP24.62■■□□□ 1.53
CSPG5-204ENST00000465441 GLT1D1Q96MS3 346 aa24.62■■□□□ 1.53
CSPG5-204ENST00000465441 ELP1O95163 1332 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 CCDC171Q6TFL3 1326 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.61■■□□□ 1.53
CSPG5-204ENST00000465441 ASB14A6NK59 587 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 DCDC2CA8MYV0 355 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 SDSP20132 328 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 GNASQ5JWF2 1037 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms