RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 ATP2A1O14983 1001 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 SGSM2O43147 1006 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 EVI5O60447 810 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 CYBAP13498 195 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 OAZ1P54368 228 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 ZNF792Q3KQV3 632 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 UBE2Q1Q7Z7E8 422 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 ANKLE1Q8NAG6 615 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 TRERF1Q96PN7 1200 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 TINF2Q9BSI4 451 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 C11orf49Q9H6J7 331 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 FBXO40Q9UH90 709 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 CCPG1Q9ULG6 757 aa14.31□□□□□ -0.12
XRN1-204ENST00000465074 DHX16O60231 1041 aaKnown RBP14.3□□□□□ -0.12
XRN1-204ENST00000465074 PDHBP11177 359 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 CAPN2P17655 700 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 NOVP48745 357 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 GJC2Q5T442 439 aaPredicted RBP14.3□□□□□ -0.12
XRN1-204ENST00000465074 PNMA1Q8ND90 353 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 CPVLQ9H3G5 476 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 ACAD9Q9H845 621 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 NR2E3Q9Y5X4 410 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 TNKSO95271 1327 aa14.3□□□□□ -0.12
XRN1-204ENST00000465074 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 MSCO60682 206 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 PLA2G6O60733 806 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 CYP21A2P08686 494 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 CNTN2Q02246 1040 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 ZNF543Q08ER8 600 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 MUM1L1Q5H9M0 696 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
XRN1-204ENST00000465074 NSMFQ6X4W1 530 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 RALYLQ86SE5 291 aaKnown RBP14.29□□□□□ -0.12
XRN1-204ENST00000465074 DGKHQ86XP1 1220 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 C7orf61Q8IZ16 206 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
XRN1-204ENST00000465074 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 CNPY2Q9Y2B0 182 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 ZNF536O15090 1300 aa14.29□□□□□ -0.12
XRN1-204ENST00000465074 SMCHD1A6NHR9 2005 aa14.28□□□□□ -0.12
XRN1-204ENST00000465074 SEPT4O43236 478 aa14.28□□□□□ -0.12
XRN1-204ENST00000465074 CHST3Q7LGC8 479 aa14.28□□□□□ -0.12
XRN1-204ENST00000465074 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
XRN1-204ENST00000465074 VAT1LQ9HCJ6 419 aa14.28□□□□□ -0.12
XRN1-204ENST00000465074 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
XRN1-204ENST00000465074 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
XRN1-204ENST00000465074 RBM8AQ9Y5S9 174 aaKnown RBP14.28□□□□□ -0.12
XRN1-204ENST00000465074 TAF6LQ9Y6J9 622 aa14.28□□□□□ -0.12
XRN1-204ENST00000465074 MCM3APO60318 1980 aa14.27□□□□□ -0.12
XRN1-204ENST00000465074 ALPK3Q96L96 1907 aa14.27□□□□□ -0.12
XRN1-204ENST00000465074 DNAJC25-GNG10A0A024R161 153 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 ERICH2A1L162 156 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 E7EWF7 191 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.13
XRN1-204ENST00000465074 ICAM1P05362 532 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
XRN1-204ENST00000465074 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.13
XRN1-204ENST00000465074 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 USH1GQ495M9 461 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 ARRDC4Q8NCT1 418 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
XRN1-204ENST00000465074 ANO2Q9NQ90 1003 aa14.27□□□□□ -0.13
XRN1-204ENST00000465074 A1CFQ9NQ94 594 aaKnown RBP14.27□□□□□ -0.13
XRN1-204ENST00000465074 PTPDC1A2A3K4 754 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 KBTBD13C9JR72 458 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 IGHA2P01877 340 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 PARP1P09874 1014 aaKnown RBP14.26□□□□□ -0.13
XRN1-204ENST00000465074 RARBP10826 455 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 GPATCH4Q5T3I0 446 aaKnown RBP14.26□□□□□ -0.13
XRN1-204ENST00000465074 NCOA7Q8NI08 942 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 MAP4K1Q92918 833 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 FERMT2Q96AC1 680 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
XRN1-204ENST00000465074 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
XRN1-204ENST00000465074 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
XRN1-204ENST00000465074 MYH6P13533 1939 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 PFASO15067 1338 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 SNAI1O95863 264 aaPredicted RBP14.25□□□□□ -0.13
XRN1-204ENST00000465074 PGK1P00558 417 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 SNHG28P0DPA3 235 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 SYN1P17600 705 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 CALML3P27482 149 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 NT5C2P49902 561 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 BMP2KLQ5H9B9 411 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 STOX1Q6ZVD7 989 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
XRN1-204ENST00000465074 CCDC144CPQ8IYA2 1237 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 PURBQ96QR8 312 aaKnown RBP14.25□□□□□ -0.13
XRN1-204ENST00000465074 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.25□□□□□ -0.13
XRN1-204ENST00000465074 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
XRN1-204ENST00000465074 ZMYND8Q9ULU4 1186 aaPredicted RBP14.25□□□□□ -0.13
XRN1-204ENST00000465074 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms