RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 RAVER2Q9HCJ3 691 aaKnown RBP17.47■□□□□ 0.39
MCF2L-220ENST00000464800 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 TNFRSF10AO00220 468 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 PBX2P40425 430 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 RASIP1Q5U651 963 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 GIMAP6Q6P9H5 292 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 C16orf59Q7L2K0 433 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 FAM126BQ8IXS8 530 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 FGD4Q96M96 766 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 CLIP2Q9UDT6 1046 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 FEM1BQ9UK73 627 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
MCF2L-220ENST00000464800 GSG1L2A8MUP6 293 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 GRXCR1A8MXD5 290 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 ACRP10323 421 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 OAZ1P54368 228 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
MCF2L-220ENST00000464800 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 SYNPO2Q9UMS6 1093 aa17.45■□□□□ 0.38
MCF2L-220ENST00000464800 IGKV6D-41A0A0C4DH26 115 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 RAB30Q15771 203 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 ZNF365Q70YC5 407 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 PPM1EQ8WY54 764 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 MTIF3Q9H2K0 278 aaKnown RBP17.44■□□□□ 0.38
MCF2L-220ENST00000464800 HOMER2Q9NSB8 354 aa17.44■□□□□ 0.38
MCF2L-220ENST00000464800 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 TDO2P48775 406 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 ZNF444Q8N0Y2 327 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-220ENST00000464800 LRRC47Q8N1G4 583 aaKnown RBP17.43■□□□□ 0.38
MCF2L-220ENST00000464800 GMCL1P1Q8NEA9 526 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 ATXN2LQ8WWM7 1075 aaKnown RBP17.43■□□□□ 0.38
MCF2L-220ENST00000464800 APPBP2Q92624 585 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 CEP95Q96GE4 821 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 KATNBL1Q9H079 304 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 IL23AQ9NPF7 189 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 MTMR4Q9NYA4 1195 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 THEGQ9P2T0 379 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 MSRAQ9UJ68 235 aa17.43■□□□□ 0.38
MCF2L-220ENST00000464800 PLIN4Q96Q06 1357 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 CTAGE5O15320 804 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 PRDM1O75626 825 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 TTLL1O95922 423 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 CD4P01730 458 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 CYP2C18P33260 490 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 NKX3-2P78367 333 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 BEX3Q00994 111 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 NOL8Q76FK4 1167 aaKnown RBP17.42■□□□□ 0.38
MCF2L-220ENST00000464800 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 OSBP2Q969R2 916 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 MKL1Q969V6 931 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 EPB41L4AQ9HCS5 686 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-220ENST00000464800 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
MCF2L-220ENST00000464800 ISY1Q9ULR0 285 aaKnown RBP17.42■□□□□ 0.38
MCF2L-220ENST00000464800 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
MCF2L-220ENST00000464800 CABYRO75952 493 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 FDX1P10109 184 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 BMP3P12645 472 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 GNAT2P19087 354 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 CNTN2Q02246 1040 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 DIEXFQ68CQ4 756 aaKnown RBP17.41■□□□□ 0.38
MCF2L-220ENST00000464800 FAM133AQ8N9E0 248 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 HIPK3Q9H422 1215 aa17.41■□□□□ 0.38
MCF2L-220ENST00000464800 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-220ENST00000464800 ASB14A6NK59 587 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 RNF113AO15541 343 aaKnown RBP17.4■□□□□ 0.38
MCF2L-220ENST00000464800 GPAA1O43292 621 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 APPP05067 770 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 STAT2P52630 851 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 FSCN1Q16658 493 aaKnown RBP17.4■□□□□ 0.38
MCF2L-220ENST00000464800 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 CXCL17Q6UXB2 119 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 TLK2Q86UE8 772 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 GPATCH3Q96I76 525 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 ASB2Q96Q27 587 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 A1CFQ9NQ94 594 aaKnown RBP17.4■□□□□ 0.38
MCF2L-220ENST00000464800 RNF146Q9NTX7 359 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 CXXC1Q9P0U4 656 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-220ENST00000464800 LCTP09848 1927 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 ASTN1O14525 1302 aa17.4■□□□□ 0.38
MCF2L-220ENST00000464800 TMEM232C9JQI7 657 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 FGBP02675 491 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-220ENST00000464800 TSPY3P0CV98 308 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 TSPY8P0CW00 308 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 COL9A1P20849 921 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 IGFBP4P22692 258 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-220ENST00000464800 CCDC85BQ15834 202 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-220ENST00000464800 SLC43A3Q8NBI5 491 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
MCF2L-220ENST00000464800 ADAMTS19Q8TE59 1207 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 278.9 ms