RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 AGBL1Q96MI9 1066 aa30.5■■■□□ 2.47
U2AF1-206ENST00000464750 ACAD9Q9H845 621 aa30.5■■■□□ 2.47
U2AF1-206ENST00000464750 SYNGAP1Q96PV0 1343 aa30.49■■■□□ 2.47
U2AF1-206ENST00000464750 ZNF213O14771 459 aa30.49■■■□□ 2.47
U2AF1-206ENST00000464750 ZNF865P0CJ78 1059 aaPredicted RBP30.49■■■□□ 2.47
U2AF1-206ENST00000464750 TTC22Q5TAA0 569 aa30.49■■■□□ 2.47
U2AF1-206ENST00000464750 CCDC174Q6PII3 467 aa30.49■■■□□ 2.47
U2AF1-206ENST00000464750 RNF146Q9NTX7 359 aa30.49■■■□□ 2.47
U2AF1-206ENST00000464750 RARBP10826 455 aa30.48■■■□□ 2.47
U2AF1-206ENST00000464750 GSPT1P15170 499 aaKnown RBP30.48■■■□□ 2.47
U2AF1-206ENST00000464750 ATN1P54259 1190 aaPredicted RBP30.48■■■□□ 2.47
U2AF1-206ENST00000464750 SNAP25P60880 206 aa30.48■■■□□ 2.47
U2AF1-206ENST00000464750 ZNF467Q7Z7K2 595 aaPredicted RBP30.48■■■□□ 2.47
U2AF1-206ENST00000464750 DSCC1Q9BVC3 393 aa30.48■■■□□ 2.47
U2AF1-206ENST00000464750 XPNPEP3Q9NQH7 507 aa30.48■■■□□ 2.47
U2AF1-206ENST00000464750 AKR1A1P14550 325 aa30.47■■■□□ 2.47
U2AF1-206ENST00000464750 LRRC41Q15345 812 aa30.47■■■□□ 2.47
U2AF1-206ENST00000464750 MAMDC4Q6UXC1 1216 aa30.47■■■□□ 2.47
U2AF1-206ENST00000464750 ESR2Q92731 530 aa30.47■■■□□ 2.47
U2AF1-206ENST00000464750 FGD4Q96M96 766 aa30.47■■■□□ 2.47
U2AF1-206ENST00000464750 GDF15Q99988 308 aa30.47■■■□□ 2.47
U2AF1-206ENST00000464750 SNAI1O95863 264 aaPredicted RBP30.46■■■□□ 2.47
U2AF1-206ENST00000464750 TKFCQ3LXA3 575 aa30.46■■■□□ 2.47
U2AF1-206ENST00000464750 TTBK2Q6IQ55 1244 aa30.46■■■□□ 2.47
U2AF1-206ENST00000464750 ZHX1Q9UKY1 873 aaPredicted RBP30.46■■■□□ 2.47
U2AF1-206ENST00000464750 DNAH12Q6ZR08 3092 aa30.46■■■□□ 2.47
U2AF1-206ENST00000464750 FRMPD2Q68DX3 1309 aaPredicted RBP30.46■■■□□ 2.47
U2AF1-206ENST00000464750 A0A1W2PPC1 479 aa30.45■■■□□ 2.47
U2AF1-206ENST00000464750 ALAS1P13196 640 aa30.45■■■□□ 2.47
U2AF1-206ENST00000464750 LENG1Q96BZ8 264 aaPredicted RBP30.45■■■□□ 2.47
U2AF1-206ENST00000464750 TTC14Q96N46 770 aa30.45■■■□□ 2.47
U2AF1-206ENST00000464750 TRERF1Q96PN7 1200 aa30.45■■■□□ 2.47
U2AF1-206ENST00000464750 A1CFQ9NQ94 594 aaKnown RBP30.45■■■□□ 2.47
U2AF1-206ENST00000464750 SLC16A2P36021 539 aa30.44■■■□□ 2.46
U2AF1-206ENST00000464750 MAGEA10P43363 369 aaPredicted RBP30.44■■■□□ 2.46
U2AF1-206ENST00000464750 IL25Q9H293 177 aa30.44■■■□□ 2.46
U2AF1-206ENST00000464750 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.44■■■□□ 2.46
U2AF1-206ENST00000464750 PCDH10Q9P2E7 1040 aa30.44■■■□□ 2.46
U2AF1-206ENST00000464750 LCTP09848 1927 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 LRRC37A2A6NM11 1700 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 POTEB2H3BUK9 544 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 PDHBP11177 359 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 RTP1P59025 263 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 SYDE2Q5VT97 1194 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 BTNL9Q6UXG8 535 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 ZKSCAN3Q9BRR0 538 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 RANBP17Q9H2T7 1088 aaKnown RBP30.43■■■□□ 2.46
U2AF1-206ENST00000464750 GPCPD1Q9NPB8 672 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 CCPG1Q9ULG6 757 aa30.43■■■□□ 2.46
U2AF1-206ENST00000464750 PGK1P00558 417 aa30.42■■■□□ 2.46
U2AF1-206ENST00000464750 NT5C2P49902 561 aa30.42■■■□□ 2.46
U2AF1-206ENST00000464750 CNTN2Q02246 1040 aa30.42■■■□□ 2.46
U2AF1-206ENST00000464750 IMMTQ16891 758 aaKnown RBP30.42■■■□□ 2.46
U2AF1-206ENST00000464750 ARMCX2Q7L311 632 aa30.42■■■□□ 2.46
U2AF1-206ENST00000464750 KDM4AO75164 1064 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 BMP8BP34820 402 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 ADCYAP1R1P41586 468 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 MUM1L1Q5H9M0 696 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 RNF180Q86T96 592 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 FAM133AQ8N9E0 248 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 CTNNA3Q9UI47 895 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 FAM184BQ9ULE4 1060 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 RAD50Q92878 1312 aa30.41■■■□□ 2.46
U2AF1-206ENST00000464750 ICAM1P05362 532 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 ACVR2BQ13705 512 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 SLC39A5Q6ZMH5 540 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 FERMT2Q96AC1 680 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 PHF24Q9UPV7 400 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 ATP11BQ9Y2G3 1177 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 LTBP2Q14767 1821 aa30.4■■■□□ 2.46
U2AF1-206ENST00000464750 B4E1Z4 1266 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 ADAMTS4O75173 837 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 SNHG28P0DPA3 235 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 ZNF543Q08ER8 600 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 IQCA1Q86XH1 822 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 DGKHQ86XP1 1220 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 CCDC144CPQ8IYA2 1237 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 ABHD16BQ9H3Z7 469 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 SYNRGQ9UMZ2 1314 aa30.39■■■□□ 2.46
U2AF1-206ENST00000464750 SOWAHBA6NEL2 793 aa30.37■■■□□ 2.45
U2AF1-206ENST00000464750 SNX17Q15036 470 aa30.37■■■□□ 2.45
U2AF1-206ENST00000464750 TRIM60Q495X7 471 aa30.37■■■□□ 2.45
U2AF1-206ENST00000464750 CCDC178Q5BJE1 867 aa30.37■■■□□ 2.45
U2AF1-206ENST00000464750 NSMFQ6X4W1 530 aa30.37■■■□□ 2.45
U2AF1-206ENST00000464750 CYP39A1Q9NYL5 469 aa30.37■■■□□ 2.45
U2AF1-206ENST00000464750 UBE2OQ9C0C9 1292 aaKnown RBP30.36■■■□□ 2.45
U2AF1-206ENST00000464750 KATNBL1Q9H079 304 aa30.36■■■□□ 2.45
U2AF1-206ENST00000464750 LAMA3Q16787 3333 aa30.35■■■□□ 2.45
U2AF1-206ENST00000464750 DUSP11O75319 330 aaKnown RBP30.35■■■□□ 2.45
U2AF1-206ENST00000464750 MDM2Q00987 491 aaPredicted RBP30.35■■■□□ 2.45
U2AF1-206ENST00000464750 CCDC144BQ3MJ40 725 aa30.35■■■□□ 2.45
U2AF1-206ENST00000464750 PNMA1Q8ND90 353 aa30.35■■■□□ 2.45
U2AF1-206ENST00000464750 RUFY2Q8WXA3 655 aa30.35■■■□□ 2.45
U2AF1-206ENST00000464750 ZSCAN10Q96SZ4 725 aaPredicted RBP30.35■■■□□ 2.45
U2AF1-206ENST00000464750 KRT23Q9C075 422 aa30.35■■■□□ 2.45
U2AF1-206ENST00000464750 PRKAG2Q9UGJ0 569 aa30.35■■■□□ 2.45
U2AF1-206ENST00000464750 SZT2Q5T011 3432 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 ASTN1O14525 1302 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 TNKSO95271 1327 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 ASB14A6NK59 587 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms