RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SLC5A1P13866 664 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 LONP1P36776 959 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 USP8P40818 1118 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 PRCPP42785 496 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 CCT5P48643 541 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ZBED6P86452 979 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 PPARAQ07869 468 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 PTGDRQ13258 359 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 NNTQ13423 1086 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 FIGNQ5HY92 759 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ALS2CLQ60I27 953 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ARL6IP4Q66PJ3 421 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 EMBQ6PCB8 327 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 GIGYF2Q6Y7W6 1299 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 NLRP10Q86W26 655 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 SPATS2Q86XZ4 545 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 MICALL1Q8N3F8 863 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 LCORLQ8N3X6 602 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ZCRB1Q8TBF4 217 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 RIN2Q8WYP3 895 aaPredicted RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 ESR2Q92731 530 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 CAPZA3Q96KX2 299 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 TOMM22Q9NS69 142 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ZNHIT6Q9NWK9 470 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 SPATA31A3Q5VYP0 1347 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 A0A1W2PQJ5 194 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 PRKAB2O43741 272 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 COBLO75128 1261 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 DDAH1O94760 285 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 IDEP14735 1019 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 VAV2P52735 878 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 CATIPQ7Z7H3 387 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 STAMQ92783 540 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 SECISBP2LQ93073 1101 aaKnown RBP8.16□□□□□ -1.1
USP48-206ENST00000464577 CAVIN3Q969G5 261 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 ZBTB9Q96C00 473 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 MAGEC2Q9UBF1 373 aaPredicted RBP8.16□□□□□ -1.1
USP48-206ENST00000464577 SNX12Q9UMY4 172 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 GDAQ9Y2T3 454 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 SHANK3Q9BYB0 1731 aa8.16□□□□□ -1.1
USP48-206ENST00000464577 ANKRD65E5RJM6 399 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 EPHB4P54760 987 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 GNGT1P63211 74 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 APBA1Q02410 837 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 C2orf54Q08AI8 447 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 TMTC3Q6ZXV5 915 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 SND1Q7KZF4 910 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP48-206ENST00000464577 CCDC91Q7Z6B0 441 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 CERS3Q8IU89 383 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 GSPT2Q8IYD1 628 aaKnown RBP8.15□□□□□ -1.1
USP48-206ENST00000464577 CNPY4Q8N129 248 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 TRIM58Q8NG06 486 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 DRC1Q96MC2 740 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
USP48-206ENST00000464577 PAGR1Q9BTK6 254 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 NHEJ1Q9H9Q4 299 aaPredicted RBP8.15□□□□□ -1.1
USP48-206ENST00000464577 EXOC1Q9NV70 894 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 NHSL1Q5SYE7 1610 aa8.15□□□□□ -1.1
USP48-206ENST00000464577 RCCD1A6NED2 376 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.11
USP48-206ENST00000464577 PSMA7O14818 248 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 ZEB2O60315 1214 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 PDE8AO60658 829 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 TACC1O75410 805 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 PRDM1O75626 825 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 ZMYND10O75800 440 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 PCP11498 1178 aaKnown RBP8.15□□□□□ -1.11
USP48-206ENST00000464577 TCP1P17987 556 aaKnown RBP8.15□□□□□ -1.11
USP48-206ENST00000464577 KIF5AQ12840 1032 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 CHRNA2Q15822 529 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 IL17AQ16552 155 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 TTI2Q6NXR4 508 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 B4GALNT4Q76KP1 1039 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 CREG2Q8IUH2 290 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 FAM114A1Q8IWE2 563 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 ENAHQ8N8S7 591 aaPredicted RBP8.15□□□□□ -1.11
USP48-206ENST00000464577 BCAS4Q8TDM0 211 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 KAT2BQ92831 832 aa8.15□□□□□ -1.11
USP48-206ENST00000464577 DHTKD1Q96HY7 919 aaPredicted RBP8.15□□□□□ -1.11
USP48-206ENST00000464577 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.11
USP48-206ENST00000464577 TOGARAM1Q9Y4F4 1720 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 TRIM49BA6NDI0 452 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 RASSF10A6NK89 507 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 ZNF185O15231 689 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 KLRC4O43908 158 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 USO1O60763 962 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 PLEKHA8P1O95397 391 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 HNRNPH3P31942 346 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 INPP5BP32019 993 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 PPP1R2P41236 205 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 STAT6P42226 847 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 GSCP56915 257 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms