RNA–Protein interactions for RNA: ENST00000464469.2

ZNF28-205, Transcript of zinc finger protein 28, humanhuman

TSL 1 (best)

Gene ZNF28, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-205ENST00000464469 SLFN13Q68D06 897 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 USP17L2Q6R6M4 530 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 CDC37L1Q7L3B6 337 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 RASGRP2Q7LDG7 609 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 NBPF11Q86T75 865 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 SCYL3Q8IZE3 742 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 CMTR1Q8N1G2 835 aaKnown RBP6.91□□□□□ -1.3
ZNF28-205ENST00000464469 STAG2Q8N3U4 1231 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 SRBD1Q8N5C6 995 aaKnown RBP6.91□□□□□ -1.3
ZNF28-205ENST00000464469 RGS22Q8NE09 1264 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 TNPO1Q92973 898 aaKnown RBP6.91□□□□□ -1.3
ZNF28-205ENST00000464469 CDCA5Q96FF9 252 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 GMCL1Q96IK5 515 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 SPZ1Q9BXG8 430 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 GLIS2Q9BZE0 524 aaPredicted RBP6.91□□□□□ -1.3
ZNF28-205ENST00000464469 AS3MTQ9HBK9 375 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 SEC63Q9UGP8 760 aaKnown RBP6.91□□□□□ -1.3
ZNF28-205ENST00000464469 ZNF112Q9UJU3 913 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 MTMR6Q9Y217 621 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 ATP6V1DQ9Y5K8 247 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 FRMPD2Q68DX3 1309 aaPredicted RBP6.91□□□□□ -1.3
ZNF28-205ENST00000464469 PTPRFP10586 1907 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 NCOR2Q9Y618 2525 aa6.91□□□□□ -1.3
ZNF28-205ENST00000464469 F5H6K3 240 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 NDUFB10O96000 172 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 F13A1P00488 732 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 GOLGA8HP0CJ92 632 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 SCG2P13521 617 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 SMARCA1P28370 1054 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 BMP8BP34820 402 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 GUCY1B3Q02153 619 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 KLRC3Q07444 240 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 IKQ13123 557 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 GNL2Q13823 731 aaKnown RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 PRKG1Q13976 671 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 TTLL12Q14166 644 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 SAFBQ15424 915 aaKnown RBP eCLIP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 ZYXQ15942 572 aaKnown RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 NOL9Q5SY16 702 aaKnown RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 MCTP1Q6DN14 999 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 RGMBQ6NW40 437 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 KCTD1Q719H9 257 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 SIAH1Q8IUQ4 282 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 FBXO18Q8NFZ0 1043 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 ACER1Q8TDN7 264 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 PIBF1Q8WXW3 757 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 ZKSCAN4Q969J2 545 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 RRP36Q96EU6 259 aaKnown RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 CDX2Q99626 313 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 KIAA1683Q9H0B3 1180 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 ZSCAN16Q9H4T2 348 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 VCPKMTQ9H867 229 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 BRMS1Q9HCU9 246 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 ZDHHC9Q9Y397 364 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 CSADQ9Y600 493 aa6.9□□□□□ -1.3
ZNF28-205ENST00000464469 V9GY48 417 aaPredicted RBP6.9□□□□□ -1.3
ZNF28-205ENST00000464469 PARP14Q460N5 1801 aa6.9□□□□□ -1.31
ZNF28-205ENST00000464469 hCG_1642624A0A1W2PR95 340 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 A0A1W2PRG0 241 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 CYTH3O43739 400 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 USP2O75604 605 aaPredicted RBP6.89□□□□□ -1.31
ZNF28-205ENST00000464469 BMP3P12645 472 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 PTPRAP18433 802 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 STAT2P52630 851 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 USP14P54578 494 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 MAP3K9P80192 1104 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 PFKFB3Q16875 520 aaPredicted RBP6.89□□□□□ -1.31
ZNF28-205ENST00000464469 KRT40Q6A162 431 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 ARMC9Q7Z3E5 817 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 BRAPQ7Z569 592 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 CCDC84Q86UT8 332 aaPredicted RBP6.89□□□□□ -1.31
ZNF28-205ENST00000464469 FERMT3Q86UX7 667 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 HOMER1Q86YM7 354 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
ZNF28-205ENST00000464469 CCDC148Q8NFR7 591 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 CCDC12Q8WUD4 166 aaPredicted RBP6.89□□□□□ -1.31
ZNF28-205ENST00000464469 LPAR1Q92633 364 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 AIFM3Q96NN9 605 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 NUP88Q99567 741 aaPredicted RBP6.89□□□□□ -1.31
ZNF28-205ENST00000464469 WDR18Q9BV38 432 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 EPHX3Q9H6B9 360 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 RIOX1Q9H6W3 641 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 ZNF408Q9H9D4 720 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 FZD1Q9UP38 647 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 LOC285556D6RIA3 1793 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 USP24Q9UPU5 2620 aa6.89□□□□□ -1.31
ZNF28-205ENST00000464469 ZNF462Q96JM2 2506 aa6.88□□□□□ -1.31
ZNF28-205ENST00000464469 MAP1BP46821 2468 aaKnown RBP6.88□□□□□ -1.31
ZNF28-205ENST00000464469 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
ZNF28-205ENST00000464469 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
ZNF28-205ENST00000464469 TMEM232C9JQI7 657 aa6.88□□□□□ -1.31
ZNF28-205ENST00000464469 UBE2Q2LH0YL09 131 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms