RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 MAP3K14Q99558 947 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 NUP58Q9BVL2 599 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 KRT23Q9C075 422 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 FAM204AQ9H8W3 233 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ANKZF1Q9H8Y5 726 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ABCB6Q9NP58 842 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ZCCHC17Q9NP64 241 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 CWC25Q9NXE8 425 aaPredicted RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 FAN1Q9Y2M0 1017 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 MROH7-TTC4A0A0A0MT08 1334 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 ERICH2A1L162 156 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 SRRM3A6NNA2 597 aaPredicted RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 TMCO5BA8MYB1 307 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 H3BM21 787 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 H3BQF6 201 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 PSMD14O00487 310 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 KCNQ3O43525 872 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 KRT86O43790 486 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 KIF1CO43896 1103 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 ERLIN2O94905 339 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 UPP2O95045 317 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 MARCKSP29966 332 aaPredicted RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 CYLC1P35663 651 aaPredicted RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 USP14P54578 494 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 ADKP55263 362 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 FAM69CQ0P6D2 419 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 CBLBQ13191 982 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 KARSQ15046 597 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 PROSER3Q2NL68 480 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 LONRF3Q496Y0 759 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 ALS2CLQ60I27 953 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 NFXL1Q6ZNB6 911 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 UBE3BQ7Z3V4 1068 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 CCDC50Q8IVM0 306 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 FNBP4Q8N3X1 1017 aaPredicted RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 CCDC155Q8N6L0 562 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 RETREG2Q8NC44 543 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 SPATA20Q8TB22 786 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 COG1Q8WTW3 980 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 RAPGEF4Q8WZA2 1011 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 ZNF512BQ96KM6 892 aaPredicted RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 GJD4Q96KN9 370 aaPredicted RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 TSEN34Q9BSV6 310 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 LZTFL1Q9NQ48 299 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 LIMA1Q9UHB6 759 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 PUF60Q9UHX1 559 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 SRPRBQ9Y5M8 271 aaKnown RBP8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 SLC12A7Q9Y666 1083 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 ATRNO75882 1429 aa8.08□□□□□ -1.12
CLSTN1-204ENST00000464286 SOS2Q07890 1332 aaPredicted RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 TMEM232C9JQI7 657 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 H7C1W4 665 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 SH2B2O14492 632 aaPredicted RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 SHOX2O60902 331 aaPredicted RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 DEXIO95424 95 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 MYL1P05976 194 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 IFNAR1P17181 557 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 AKAP17AQ02040 695 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 MLECQ14165 292 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 ALX1Q15699 326 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 CDKAL1Q5VV42 579 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 USHBP1Q8N6Y0 703 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 CAGE1Q8TC20 777 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 CCDC47Q96A33 483 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 EDC3Q96F86 508 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 SEC62Q99442 399 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 RNF41Q9H4P4 317 aaPredicted RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 A1CFQ9NQ94 594 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 AATFQ9NY61 560 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 ADD3Q9UEY8 706 aaKnown RBP8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 GGA2Q9UJY4 613 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 SAR1BQ9Y6B6 198 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 C5P01031 1676 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 RTL9Q8NET4 1388 aa8.07□□□□□ -1.12
CLSTN1-204ENST00000464286 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 GOLGA6CA6NDK9 693 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 GOLGA6BA6NDN3 693 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 LRRC10BA6NIK2 292 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 TRIM75PA6NK02 468 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 KIF28PB7ZC32 967 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 H7C1D1 291 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 CLGNO14967 610 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 N4BP3O15049 544 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 POLR2DO15514 142 aaKnown RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 FGAP02671 866 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 MMP1P03956 469 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RHOXF2BP0C7M4 288 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 UQCRFS1P1P0C7P4 283 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 GOLGA6DP0CG33 693 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 EPB41P11171 864 aaKnown RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 GNAT2P19087 354 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 EEF1GP26641 437 aaKnown RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RDXP35241 583 aaKnown RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 PBX1P40424 430 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms