RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
TMEM54-203ENST00000463914 EYSQ5T1H1 3165 aa12.22□□□□□ -0.45
TMEM54-203ENST00000463914 TTC28Q96AY4 2481 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 ASTN1O14525 1302 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 ELP1O95163 1332 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.21□□□□□ -0.45
TMEM54-203ENST00000463914 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.21□□□□□ -0.45
TMEM54-203ENST00000463914 GRXCR1A8MXD5 290 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.45
TMEM54-203ENST00000463914 ACRP10323 421 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 CSF2RAP15509 400 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 CDK7P50613 346 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 BEX3Q00994 111 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 CNTN2Q02246 1040 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 TMEM240Q5SV17 173 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 C16orf59Q7L2K0 433 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 CCDC144CPQ8IYA2 1237 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 ANKRD35Q8N283 1001 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 ABHD16BQ9H3Z7 469 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 FEM1BQ9UK73 627 aa12.21□□□□□ -0.45
TMEM54-203ENST00000463914 DDX49Q9Y6V7 483 aaKnown RBP12.21□□□□□ -0.45
TMEM54-203ENST00000463914 CDH23Q9H251 3354 aa12.21□□□□□ -0.46
TMEM54-203ENST00000463914 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 ARVCFO00192 962 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 TTLL1O95922 423 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 APPP05067 770 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 OAZ1P54368 228 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 GJA9P57773 515 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 PPIGQ13427 754 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 FAM133AQ8N9E0 248 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 PCSK9Q8NBP7 692 aaKnown RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 MKL1Q969V6 931 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 GPATCH3Q96I76 525 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 SEC62Q99442 399 aaKnown RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 PBX4Q9BYU1 374 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 A1CFQ9NQ94 594 aaKnown RBP12.2□□□□□ -0.46
TMEM54-203ENST00000463914 RNF146Q9NTX7 359 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 FBXO40Q9UH90 709 aa12.2□□□□□ -0.46
TMEM54-203ENST00000463914 ZNF536O15090 1300 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 PRUNE2Q8WUY3 3088 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
TMEM54-203ENST00000463914 BMP3P12645 472 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 GNAT2P19087 354 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 CYP2C18P33260 490 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 RASIP1Q5U651 963 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 DIEXFQ68CQ4 756 aaKnown RBP12.19□□□□□ -0.46
TMEM54-203ENST00000463914 CXCL17Q6UXB2 119 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 ZNF365Q70YC5 407 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 SPC25Q9HBM1 224 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
TMEM54-203ENST00000463914 UMODL1Q5DID0 1318 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 TMEM232C9JQI7 657 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 CD4P01730 458 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 TSPY3P0CV98 308 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 TSPY8P0CW00 308 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 SNAP25P60880 206 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 TFAP4Q01664 338 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 IKQ13123 557 aaPredicted RBP12.18□□□□□ -0.46
TMEM54-203ENST00000463914 CCDC129Q6ZRS4 1044 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 NOL8Q76FK4 1167 aaKnown RBP12.18□□□□□ -0.46
TMEM54-203ENST00000463914 TLK2Q86UE8 772 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
TMEM54-203ENST00000463914 PRDM12Q9H4Q4 367 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
TMEM54-203ENST00000463914 CXXC1Q9P0U4 656 aaPredicted RBP12.18□□□□□ -0.46
TMEM54-203ENST00000463914 PATL2C9JE40 543 aaKnown RBP12.17□□□□□ -0.46
TMEM54-203ENST00000463914 FOXP2O15409 715 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
TMEM54-203ENST00000463914 ALAS1P13196 640 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 MCCP23508 829 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 SLC1A4P43007 532 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 STAT2P52630 851 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 NKX3-2P78367 333 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 TNFAIP2Q03169 654 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 PPARAQ07869 468 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 TMEM63BQ5T3F8 832 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 PSRC1Q6PGN9 363 aaPredicted RBP12.17□□□□□ -0.46
TMEM54-203ENST00000463914 CCDC174Q6PII3 467 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 FBXO16Q8IX29 292 aaPredicted RBP12.17□□□□□ -0.46
TMEM54-203ENST00000463914 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
TMEM54-203ENST00000463914 NAPBQ9H115 298 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms