RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SLC26A6Q9BXS9 759 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 BTBD7Q9P203 1132 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 RBPJLQ9UBG7 517 aa16.09■□□□□ 0.17
PHACTR4-203ENST00000463428 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 ZBTB5O15062 677 aa16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 OTUD7BQ6GQQ9 843 aa16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 RRP36Q96EU6 259 aaKnown RBP16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 ZNF214Q9UL59 606 aaPredicted RBP16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.16
PHACTR4-203ENST00000463428 PEX10O60683 326 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 ZBED4O75132 1171 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 PARK7Q99497 189 aaKnown RBP16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 TXNRD2Q9NNW7 524 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 RBM27Q9P2N5 1060 aaKnown RBP16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
PHACTR4-203ENST00000463428 CA12O43570 354 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 DEXIO95424 95 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 OAZ1P54368 228 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 TAF1CQ15572 869 aaPredicted RBP16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 Q3C1V9 767 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 AIFM3Q96NN9 605 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 RAVER2Q9HCJ3 691 aaKnown RBP16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 MORF4L1Q9UBU8 362 aa16.06■□□□□ 0.16
PHACTR4-203ENST00000463428 ICAM1P05362 532 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 SCG2P13521 617 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 GJB2P29033 226 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 GCLCP48506 637 aaPredicted RBP16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 CCDC174Q6PII3 467 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 AGBL1Q96MI9 1066 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 CFHR5Q9BXR6 569 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
PHACTR4-203ENST00000463428 TLR2O60603 784 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 BCRP11274 1271 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 TAL1P17542 331 aaPredicted RBP16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 CRHR2Q13324 411 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 WWC2Q6AWC2 1192 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 TYW1BQ6NUM6 668 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 C17orf99Q6UX52 265 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 SMCR8Q8TEV9 937 aaPredicted RBP16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 COA7Q96BR5 231 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 R3HDMLQ9H3Y0 253 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 ZFYVE28Q9HCC9 887 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 RNF186Q9NXI6 227 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 SMC3Q9UQE7 1217 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 RIPK3Q9Y572 518 aa16.04■□□□□ 0.16
PHACTR4-203ENST00000463428 STXBP3O00186 592 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 STAT3P40763 770 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 ERVK-24P63145 666 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 GPKOWQ92917 476 aaPredicted RBP eCLIP16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 TEX13BQ9BXU2 312 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 BARHL2Q9NY43 387 aa16.03■□□□□ 0.16
PHACTR4-203ENST00000463428 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 RIOX2Q8IUF8 465 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 ANKRD13CQ8N6S4 541 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 SPRYD3Q8NCJ5 442 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 WASF1Q92558 559 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 ALG1Q9BT22 464 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 MOV10L1Q9BXT6 1211 aaKnown RBP16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 CPA4Q9UI42 421 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 PNMA2Q9UL42 364 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 CTDP1Q9Y5B0 961 aaPredicted RBP16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 PCDHA1Q9Y5I3 950 aa16.02■□□□□ 0.16
PHACTR4-203ENST00000463428 OPLAHO14841 1288 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 FAM110CQ1W6H9 321 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 USH1GQ495M9 461 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 SNRNP48Q6IEG0 339 aaKnown RBP16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 HEATR3Q7Z4Q2 680 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 GPRC5AQ8NFJ5 357 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 CLEC4DQ8WXI8 215 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.15
PHACTR4-203ENST00000463428 TRPA1O75762 1119 aa16.01■□□□□ 0.15
PHACTR4-203ENST00000463428 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
PHACTR4-203ENST00000463428 TRAF1Q13077 416 aa16.01■□□□□ 0.15
PHACTR4-203ENST00000463428 TKFCQ3LXA3 575 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms