RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ZXDAP98168 799 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 SMAD2Q15796 467 aaKnown RBP16.49■□□□□ 0.23
C9orf3-211ENST00000463372 PTPROQ16827 1216 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 TIGD5Q53EQ6 642 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 TGFBRAP1Q8WUH2 860 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
C9orf3-211ENST00000463372 RMDN1Q96DB5 314 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 CEP126Q9P2H0 1117 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
C9orf3-211ENST00000463372 BAIAP3O94812 1187 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 DSG3P32926 999 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 BEX3Q00994 111 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
C9orf3-211ENST00000463372 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 CLDND1Q9NY35 253 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 TANC1Q9C0D5 1861 aa16.48■□□□□ 0.23
C9orf3-211ENST00000463372 FLT1P17948 1338 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 ADCY6O43306 1168 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 FLOT1O75955 427 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 BAG3O95817 575 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 PLCG2P16885 1265 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 MCTP2Q6DN12 878 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
C9orf3-211ENST00000463372 TRIP12Q14669 1992 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-211ENST00000463372 SPTBN2O15020 2390 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 A0A1B0GUL7 405 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 STXBP3O00186 592 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-211ENST00000463372 SIGLEC14Q08ET2 396 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 ST3GAL2Q16842 350 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 BANK1Q8NDB2 785 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 SAP30BPQ9UHR5 308 aaKnown RBP16.46■□□□□ 0.23
C9orf3-211ENST00000463372 FAM208BQ5VWN6 2430 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 CEP250Q9BV73 2442 aa16.46■□□□□ 0.23
C9orf3-211ENST00000463372 GRIN2DO15399 1336 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 TNKSO95271 1327 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 FASNP49327 2511 aaKnown RBP16.45■□□□□ 0.22
C9orf3-211ENST00000463372 LINC01553A4QN01 128 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 CTAGE5O15320 804 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 CYP2C9P11712 490 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 ADORA1P30542 326 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 TMEM132BQ14DG7 1078 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-211ENST00000463372 TATDN1Q6P1N9 297 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 MAMDC4Q6UXC1 1216 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
C9orf3-211ENST00000463372 AATFQ9NY61 560 aaKnown RBP eCLIP16.45■□□□□ 0.22
C9orf3-211ENST00000463372 ZEB2O60315 1214 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 PUM1Q14671 1186 aaKnown RBP eCLIP16.44■□□□□ 0.22
C9orf3-211ENST00000463372 RALBP1Q15311 655 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 CLUL1Q15846 466 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 TCEAL5Q5H9L2 206 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 NOL8Q76FK4 1167 aaKnown RBP16.44■□□□□ 0.22
C9orf3-211ENST00000463372 FRMD5Q7Z6J6 570 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 TMCO2Q7Z6W1 182 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-211ENST00000463372 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 RETREG2Q8NC44 543 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 RAD9AQ99638 391 aa16.44■□□□□ 0.22
C9orf3-211ENST00000463372 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-211ENST00000463372 MBTPS2O43462 519 aa16.43■□□□□ 0.22
C9orf3-211ENST00000463372 NCK2O43639 380 aa16.43■□□□□ 0.22
C9orf3-211ENST00000463372 COPB2P35606 906 aa16.43■□□□□ 0.22
C9orf3-211ENST00000463372 NKX3-2P78367 333 aa16.43■□□□□ 0.22
C9orf3-211ENST00000463372 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
C9orf3-211ENST00000463372 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
C9orf3-211ENST00000463372 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-211ENST00000463372 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
C9orf3-211ENST00000463372 PSMC6P62333 389 aa16.42■□□□□ 0.22
C9orf3-211ENST00000463372 COL19A1Q14993 1142 aa16.42■□□□□ 0.22
C9orf3-211ENST00000463372 ACAP1Q15027 740 aa16.42■□□□□ 0.22
C9orf3-211ENST00000463372 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
C9orf3-211ENST00000463372 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
C9orf3-211ENST00000463372 TRMT13Q9NUP7 481 aaKnown RBP16.42■□□□□ 0.22
C9orf3-211ENST00000463372 USP24Q9UPU5 2620 aa16.42■□□□□ 0.22
C9orf3-211ENST00000463372 STAT3P40763 770 aa16.41■□□□□ 0.22
C9orf3-211ENST00000463372 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-211ENST00000463372 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
C9orf3-211ENST00000463372 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
C9orf3-211ENST00000463372 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
C9orf3-211ENST00000463372 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
C9orf3-211ENST00000463372 CIAO1O76071 339 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 GJB5O95377 273 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 IQCF3P0C7M6 154 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 TNFAIP2Q03169 654 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
C9orf3-211ENST00000463372 ZNF467Q7Z7K2 595 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-211ENST00000463372 ASIC4Q96FT7 647 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 C17orf80Q9BSJ5 609 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 AP5M1Q9H0R1 490 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 LRP2BPQ9P2M1 347 aa16.4■□□□□ 0.22
C9orf3-211ENST00000463372 NLRC5Q86WI3 1866 aa16.39■□□□□ 0.22
C9orf3-211ENST00000463372 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms