RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 GPAA1O43292 621 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 OAZ1P54368 228 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 GJA9P57773 515 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 ARMCX2Q7L311 632 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 SPC25Q9HBM1 224 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 ZNF287Q9HBT7 754 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 MTMR4Q9NYA4 1195 aa24.76■■□□□ 1.55
CPSF7-209ENST00000463244 RNF113AO15541 343 aaKnown RBP24.75■■□□□ 1.55
CPSF7-209ENST00000463244 PRDM1O75626 825 aa24.75■■□□□ 1.55
CPSF7-209ENST00000463244 ZNF444Q8N0Y2 327 aaPredicted RBP24.75■■□□□ 1.55
CPSF7-209ENST00000463244 GMCL1P1Q8NEA9 526 aa24.75■■□□□ 1.55
CPSF7-209ENST00000463244 A0A0U1RQG5 324 aaPredicted RBP24.74■■□□□ 1.55
CPSF7-209ENST00000463244 TTLL1O95922 423 aa24.74■■□□□ 1.55
CPSF7-209ENST00000463244 GNAT2P19087 354 aa24.74■■□□□ 1.55
CPSF7-209ENST00000463244 TDO2P48775 406 aa24.74■■□□□ 1.55
CPSF7-209ENST00000463244 PPIGQ13427 754 aaKnown RBP eCLIP24.74■■□□□ 1.552e-7■□□□□ 11.1
CPSF7-209ENST00000463244 C16orf59Q7L2K0 433 aa24.74■■□□□ 1.55
CPSF7-209ENST00000463244 LRRC47Q8N1G4 583 aaKnown RBP24.74■■□□□ 1.55
CPSF7-209ENST00000463244 KATNBL1Q9H079 304 aa24.74■■□□□ 1.55
CPSF7-209ENST00000463244 ZNF576Q9H609 170 aa24.74■■□□□ 1.55
CPSF7-209ENST00000463244 PLIN4Q96Q06 1357 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 ARVCFO00192 962 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 ZFYP08048 801 aaPredicted RBP24.73■■□□□ 1.55
CPSF7-209ENST00000463244 GNASQ5JWF2 1037 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 TMEM240Q5SV17 173 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 CCDC144CPQ8IYA2 1237 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 VTI1AQ96AJ9 217 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 TIFAQ96CG3 184 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 NCOR1O75376 2440 aa24.73■■□□□ 1.55
CPSF7-209ENST00000463244 M0R2C6 588 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 CTAGE5O15320 804 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 RASIP1Q5U651 963 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 TSHZ3Q63HK5 1081 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 CCDC174Q6PII3 467 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 FAM126BQ8IXS8 530 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 USP38Q8NB14 1042 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 SYMPKQ92797 1274 aaKnown RBP24.72■■□□□ 1.55
CPSF7-209ENST00000463244 GPATCH3Q96I76 525 aa24.72■■□□□ 1.55
CPSF7-209ENST00000463244 APPP05067 770 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 FDX1P10109 184 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 BMP3P12645 472 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 NKX3-2P78367 333 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 C20orf194Q5TEA3 1177 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 SLFN13Q68D06 897 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 HOMER2Q9NSB8 354 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 RCAN3Q9UKA8 241 aa24.71■■□□□ 1.55
CPSF7-209ENST00000463244 PATL2C9JE40 543 aaKnown RBP24.7■■□□□ 1.54
CPSF7-209ENST00000463244 CSF2RAP15509 400 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 CNTN2Q02246 1040 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 IFNL3Q8IZI9 196 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 TMEM199Q8N511 208 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 FAM133AQ8N9E0 248 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 NEDD1Q8NHV4 660 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 PBX4Q9BYU1 374 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 ACAD9Q9H845 621 aa24.7■■□□□ 1.54
CPSF7-209ENST00000463244 TSPY3P0CV98 308 aa24.69■■□□□ 1.54
CPSF7-209ENST00000463244 TSPY8P0CW00 308 aa24.69■■□□□ 1.54
CPSF7-209ENST00000463244 PPP1R12CQ9BZL4 782 aa24.69■■□□□ 1.54
CPSF7-209ENST00000463244 DCTPP1Q9H773 170 aa24.69■■□□□ 1.54
CPSF7-209ENST00000463244 ZNF536O15090 1300 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.68■■□□□ 1.54
CPSF7-209ENST00000463244 GRXCR1A8MXD5 290 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 TMEM232C9JQI7 657 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 TLR3O15455 904 aaKnown RBP24.68■■□□□ 1.54
CPSF7-209ENST00000463244 CD4P01730 458 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 PBX2P40425 430 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 STAT2P52630 851 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 PSRC1Q6PGN9 363 aaPredicted RBP24.68■■□□□ 1.54
CPSF7-209ENST00000463244 A1CFQ9NQ94 594 aaKnown RBP24.68■■□□□ 1.54
CPSF7-209ENST00000463244 PRDM6Q9NQX0 595 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 LRRC37A2A6NM11 1700 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 XIRP2A4UGR9 3374 aa24.68■■□□□ 1.54
CPSF7-209ENST00000463244 ASTN1O14525 1302 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 ACRP10323 421 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 BEX3Q00994 111 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 TNFAIP2Q03169 654 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 PDE4BQ07343 736 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 TJAP1Q5JTD0 557 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 DIEXFQ68CQ4 756 aaKnown RBP24.67■■□□□ 1.54
CPSF7-209ENST00000463244 ZNF365Q70YC5 407 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 RNF146Q9NTX7 359 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 REV3LO60673 3130 aa24.67■■□□□ 1.54
CPSF7-209ENST00000463244 SOWAHBA6NEL2 793 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 TFAP4Q01664 338 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 LRRFIP1Q32MZ4 808 aaKnown RBP24.66■■□□□ 1.54
CPSF7-209ENST00000463244 CCDC129Q6ZRS4 1044 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 FAM160B2Q86V87 743 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 SLC43A3Q8NBI5 491 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 CHURC1Q8WUH1 139 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 GMCL1Q96IK5 515 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 AGBL1Q96MI9 1066 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 NACAP1Q9BZK3 213 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 GNEQ9Y223 722 aaKnown RBP24.66■■□□□ 1.54
CPSF7-209ENST00000463244 BDP1A6H8Y1 2624 aa24.66■■□□□ 1.54
CPSF7-209ENST00000463244 ASB14A6NK59 587 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 CYP2C18P33260 490 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 TKFCQ3LXA3 575 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 CXCL17Q6UXB2 119 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 STAG1Q8WVM7 1258 aa24.65■■□□□ 1.54
CPSF7-209ENST00000463244 SEC62Q99442 399 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms