RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SMC2O95347 1197 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 TPM4P67936 248 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 RRP1BQ14684 758 aaKnown RBP11.54□□□□□ -0.56
MSH5-211ENST00000463144 NONOQ15233 471 aaKnown RBP eCLIP11.54□□□□□ -0.56
MSH5-211ENST00000463144 LETM2Q2VYF4 491 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 LRRC8AQ8IWT6 810 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 IQUBQ8NA54 791 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 GMLQ99445 158 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 PSMD1Q99460 953 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
MSH5-211ENST00000463144 PNMA6FA0A0J9YX94 578 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 ENTPD3O75355 529 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 RAD17O75943 681 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 SEPT2Q15019 361 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 KARSQ15046 597 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 TRMT44Q8IYL2 757 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 RTKN2Q8IZC4 609 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 TBCKQ8TEA7 893 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 NYAP2Q9P242 653 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 hCG_1984214I3L0E3 225 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 PSMD14O00487 310 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 CCNT1O60563 726 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 PRPHP41219 470 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 CUL4BQ13620 913 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 GPATCH4Q5T3I0 446 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 NEK8Q86SG6 692 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 REXO1Q8N1G1 1221 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 ENOX1Q8TC92 643 aaKnown RBP11.53□□□□□ -0.56
MSH5-211ENST00000463144 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 BLZF1Q9H2G9 400 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 KANSL2Q9H9L4 492 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
MSH5-211ENST00000463144 LAD1O00515 517 aa11.52□□□□□ -0.56
MSH5-211ENST00000463144 GDF11O95390 407 aa11.52□□□□□ -0.56
MSH5-211ENST00000463144 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.56
MSH5-211ENST00000463144 ZNF18P17022 549 aa11.52□□□□□ -0.56
MSH5-211ENST00000463144 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.56
MSH5-211ENST00000463144 LRRC15Q8TF66 581 aa11.52□□□□□ -0.56
MSH5-211ENST00000463144 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.56
MSH5-211ENST00000463144 R3HCC1Q9Y3T6 440 aaKnown RBP11.52□□□□□ -0.56
MSH5-211ENST00000463144 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 ADCY7P51828 1080 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 CCZ1BP86790 482 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 CCZ1P86791 482 aaPredicted RBP11.52□□□□□ -0.57
MSH5-211ENST00000463144 HSP90AA4PQ58FG1 418 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 TMC6Q7Z403 805 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.57
MSH5-211ENST00000463144 LARGE2Q8N3Y3 721 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 CCDC34Q96HJ3 373 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 CCSER1Q9C0I3 900 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 INTS13Q9NVM9 706 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 IMPACTQ9P2X3 320 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 NFE2L3Q9Y4A8 694 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 ARFGEF1Q9Y6D6 1849 aa11.52□□□□□ -0.57
MSH5-211ENST00000463144 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 ZBTB5O15062 677 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 GTPBP6O43824 516 aaPredicted RBP11.51□□□□□ -0.57
MSH5-211ENST00000463144 SERPINC1P01008 464 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 OR52Z1P0C646 297 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 ERCC5P28715 1186 aaPredicted RBP11.51□□□□□ -0.57
MSH5-211ENST00000463144 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
MSH5-211ENST00000463144 UBASH3AP57075 661 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 TMEM179Q6ZVK1 233 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 PYM1Q9BRP8 204 aaKnown RBP11.51□□□□□ -0.57
MSH5-211ENST00000463144 RIC8AQ9NPQ8 531 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 DISC1Q9NRI5 854 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 SAMSN1Q9NSI8 373 aaKnown RBP11.51□□□□□ -0.57
MSH5-211ENST00000463144 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
MSH5-211ENST00000463144 CLRN2A0PK11 232 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 TCP10L2B9ZVM9 353 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 TMEM232C9JQI7 657 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 MYO1BO43795 1136 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 NEMFO60524 1076 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 ICA1Q05084 483 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 UBE2SQ16763 222 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 PPP1R18Q6NYC8 613 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
MSH5-211ENST00000463144 RAD21O60216 631 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 TXLNAP40222 546 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 STAT6P42226 847 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms