RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ZNF507Q8TCN5 953 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 DCAF4Q8WV16 495 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 CCDC74BQ96LY2 380 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 CDC6Q99741 560 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 CBX8Q9HC52 389 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 AASDHPPTQ9NRN7 309 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 SWAP70Q9UH65 585 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 ZNF281Q9Y2X9 895 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 ST14Q9Y5Y6 855 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 ADAM11O75078 769 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 RGL3Q3MIN7 710 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 CT47A1Q5JQC4 288 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 FAXDC2Q96IV6 333 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 GAS2L1Q99501 681 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 CELF4Q9BZC1 486 aaKnown RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 SUGCTQ9HAC7 445 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 CGGBP1Q9UFW8 167 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 VSTM5A8MXK1 200 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 ITGA6P23229 1130 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 FLT3P36888 993 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 GPR3P46089 330 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 SETDB1Q15047 1291 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 SF1Q15637 639 aaKnown RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 GRAMD1BQ3KR37 738 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 C6orf118Q5T5N4 469 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 HEATR6Q6AI08 1181 aaKnown RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 FAM35AQ86V20 835 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 SPNS2Q8IVW8 549 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 PRR18Q8N4B5 295 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 LRRN4CLQ8ND94 238 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 SSH1Q8WYL5 1049 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 TAAR9Q96RI9 348 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 PDGFDQ9GZP0 370 aaPredicted RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 EMC7Q9NPA0 242 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 IPPQ9Y573 584 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 LOC100289279A0A1B0GTE1 492 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 SH3BP5O60239 455 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 FOSP01100 380 aaPredicted RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 CENPBP07199 599 aaPredicted RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 CD53P19397 219 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 MAOBP27338 520 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 LACTBP83111 547 aaPredicted RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 NEUROD1Q13562 356 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 SUZ12Q15022 739 aaKnown RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 DACT2Q5SW24 774 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 GTF2IRD2BQ6EKJ0 949 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 GTF2IRD2Q86UP8 949 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 MAP4K3Q8IVH8 894 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 NAA15Q9BXJ9 866 aaKnown RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 CEP131Q9UPN4 1083 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 LUC7L2Q9Y383 392 aaKnown RBP3.9□□□□□ -1.78
SMC4-203ENST00000462668 SCINQ9Y6U3 715 aa3.9□□□□□ -1.78
SMC4-203ENST00000462668 LTFP02788 710 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 NAT1P18440 290 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 EIF2AK2P19525 551 aaKnown RBP3.9□□□□□ -1.79
SMC4-203ENST00000462668 SESN3P58005 492 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 GPR85P60893 370 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 SAFB2Q14151 953 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMC4-203ENST00000462668 UBE3DQ7Z6J8 389 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 PSMG3-AS1Q96PY0 264 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 UBE2OQ9C0C9 1292 aaKnown RBP3.9□□□□□ -1.79
SMC4-203ENST00000462668 JADE2Q9NQC1 790 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 BICRAQ9NZM4 1560 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 LUZP4Q9P127 313 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 PPP1R9AQ9ULJ8 1098 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 PHTF1Q9UMS5 762 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 DNM3Q9UQ16 869 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 APAF1O14727 1248 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 TCEA3O75764 348 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 TIAF1O95411 115 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 CPP00450 1065 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 RAG1P15918 1043 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 ATP2A2P16615 1042 aaKnown RBP3.9□□□□□ -1.79
SMC4-203ENST00000462668 ID3Q02535 119 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 ODF1Q14990 250 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 RRP12Q5JTH9 1297 aaKnown RBP3.9□□□□□ -1.79
SMC4-203ENST00000462668 C10orf62Q5T681 223 aaPredicted RBP3.9□□□□□ -1.79
SMC4-203ENST00000462668 LMBR1Q8WVP7 490 aa3.9□□□□□ -1.79
SMC4-203ENST00000462668 NOB1Q9ULX3 412 aaKnown RBP3.9□□□□□ -1.79
SMC4-203ENST00000462668 TNFRSF10AO00220 468 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 FSCN2O14926 492 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 GRIK1P39086 918 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ZNF445P59923 1031 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 GAS6Q14393 721 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 GRM3Q14832 879 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 TPH2Q8IWU9 490 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 KLHL23Q8NBE8 558 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 CLRN3Q8NCR9 226 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 FAM13CQ8NE31 585 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 BAHD1Q8TBE0 780 aaPredicted RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 BTN2A2Q8WVV5 523 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 KCTD13Q8WZ19 329 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 TTC17Q96AE7 1141 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 MTMR8Q96EF0 704 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 MPHOSPH6Q99547 160 aaKnown RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 LGR4Q9BXB1 951 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ASPNQ9BXN1 380 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ZNF277Q9NRM2 450 aaPredicted RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 ABHD14A-ACY1A0A1B0GW23 586 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 DCDC2CA8MYV0 355 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms