RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 KLRG1Q96E93 195 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 GINM1Q9NU53 330 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 NOL7Q9UMY1 257 aaKnown RBP17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 A0A1B0GVL5 298 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 FSD2A1L4K1 749 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 POTECB2RU33 542 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 EPHX2P34913 555 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 HOOK2Q96ED9 719 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 SH2D4AQ9H788 454 aa17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 BIN2Q9UBW5 565 aaPredicted RBP17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 FBXO2Q9UK22 296 aaPredicted RBP17.17■□□□□ 0.34
RPRD1B-203ENST00000462548 GNA11P29992 359 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 INF2Q27J81 1249 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 FEZ1Q99689 392 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 ZC3H4Q9UPT8 1303 aaKnown RBP17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 USP2O75604 605 aaPredicted RBP17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 ADCY7P51828 1080 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 STAT2P52630 851 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 JAKMIP3Q5VZ66 844 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 PPP1R18Q6NYC8 613 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
RPRD1B-203ENST00000462548 PTPRAP18433 802 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 NDUFA8P51970 172 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 CAMK4Q16566 473 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 KIAA1683Q9H0B3 1180 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 PHIPQ8WWQ0 1821 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 PTPREP23469 700 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 TRAPPC10P48553 1259 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 UBE2SQ16763 222 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 USP50Q70EL3 339 aaPredicted RBP17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 SULF1Q8IWU6 871 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 REXO1Q8N1G1 1221 aaKnown RBP17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
RPRD1B-203ENST00000462548 CUTAO60888 179 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 CMA1P23946 247 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 SPP2Q13103 211 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 MTMR2Q13614 643 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 CCDC73Q6ZRK6 1079 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 KRT26Q7Z3Y9 468 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 FMR1NBQ8N0W7 255 aaPredicted RBP17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 KRI1Q8N9T8 703 aaKnown RBP17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 NUP62CLQ9H1M0 184 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
RPRD1B-203ENST00000462548 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 LRSAM1Q6UWE0 723 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 KIFC2Q96AC6 838 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 WDR18Q9BV38 432 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 PAPPA2Q9BXP8 1791 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 EDIL3O43854 480 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 PFKFB1P16118 471 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 MCM7P33993 719 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 CLK2P49760 499 aaKnown RBP17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 PTGDRQ13258 359 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 USH1GQ495M9 461 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 AMNQ9BXJ7 453 aa17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
RPRD1B-203ENST00000462548 SCN4AP35499 1836 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 PLA2G6O60733 806 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 ATP2C1P98194 919 aaPredicted RBP17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 NOL9Q5SY16 702 aaKnown RBP17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 PICK1Q9NRD5 415 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 GOLGA6L3A6NEY3 463 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 CUL5Q93034 780 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 RANBP17Q9H2T7 1088 aaKnown RBP17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 PSTPIP2Q9H939 334 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 OTOFQ9HC10 1997 aa17.12■□□□□ 0.33
RPRD1B-203ENST00000462548 OPLAHO14841 1288 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 WDR46O15213 610 aaKnown RBP17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 IL17AQ16552 155 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 EAPPQ56P03 285 aaPredicted RBP17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 CCDC174Q6PII3 467 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 FAM160B2Q86V87 743 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms