RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CNTNAP5Q8WYK1 1306 aa22.33■■□□□ 1.17
XPA-202ENST00000462523 PFKFB2O60825 505 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 ZBED4O75132 1171 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 FDX1P10109 184 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 ST3GAL1Q11201 340 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 SCRN1Q12765 414 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 NTRK3Q16288 839 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 CDC37Q16543 378 aaPredicted RBP22.33■■□□□ 1.16
XPA-202ENST00000462523 CCDC174Q6PII3 467 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 CPXCR1Q8N123 301 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 CCDC82Q8N4S0 544 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 AGBL1Q96MI9 1066 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 MOV10L1Q9BXT6 1211 aaKnown RBP22.33■■□□□ 1.16
XPA-202ENST00000462523 RIPK3Q9Y572 518 aa22.33■■□□□ 1.16
XPA-202ENST00000462523 HTTP42858 3142 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 PPP1R11O60927 126 aaPredicted RBP22.32■■□□□ 1.16
XPA-202ENST00000462523 SMARCA1P28370 1054 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 GNAQP50148 359 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 LACTBP83111 547 aaPredicted RBP22.32■■□□□ 1.16
XPA-202ENST00000462523 SP3Q02447 781 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 PPP2R5BQ15173 497 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 PIGSQ96S52 555 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 LZTS2Q9BRK4 669 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 ARHGAP39Q9C0H5 1083 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 LIMCH1Q9UPQ0 1083 aa22.32■■□□□ 1.16
XPA-202ENST00000462523 DHX16O60231 1041 aaKnown RBP22.31■■□□□ 1.16
XPA-202ENST00000462523 ST18O60284 1047 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 ECM2O94769 699 aaPredicted RBP22.31■■□□□ 1.16
XPA-202ENST00000462523 STAT3P40763 770 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 OAZ1P54368 228 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 PLS1Q14651 629 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 QRICH1Q2TAL8 776 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 NECAB1Q8N987 351 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 TEX13BQ9BXU2 312 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 EFCC1Q9HA90 598 aa22.31■■□□□ 1.16
XPA-202ENST00000462523 ICAM1P05362 532 aa22.3■■□□□ 1.16
XPA-202ENST00000462523 SNRNP48Q6IEG0 339 aaKnown RBP22.3■■□□□ 1.16
XPA-202ENST00000462523 PIBF1Q8WXW3 757 aa22.3■■□□□ 1.16
XPA-202ENST00000462523 SLKQ9H2G2 1235 aaPredicted RBP22.3■■□□□ 1.16
XPA-202ENST00000462523 CASP8AP2Q9UKL3 1982 aa22.3■■□□□ 1.16
XPA-202ENST00000462523 CCDC196A0A1B0GTZ2 297 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 hCG_1642624A0A1W2PR95 340 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 ZBTB5O15062 677 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 DTNBO60941 627 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 RIOX2Q8IUF8 465 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 IL27Q8NEV9 243 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 GTF3C6Q969F1 213 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 PLXNB2O15031 1838 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 FKTNO75072 461 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 PPFIA3O75145 1194 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 ERCC3P19447 782 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 LBX1P52954 281 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 CD99L2Q8TCZ2 262 aa22.29■■□□□ 1.16
XPA-202ENST00000462523 CTDP1Q9Y5B0 961 aaPredicted RBP22.29■■□□□ 1.16
XPA-202ENST00000462523 DOCK3Q8IZD9 2030 aa22.28■■□□□ 1.16
XPA-202ENST00000462523 CTDNEP1O95476 244 aa22.28■■□□□ 1.16
XPA-202ENST00000462523 CTCFP49711 727 aaPredicted RBP22.28■■□□□ 1.16
XPA-202ENST00000462523 PHKBQ93100 1093 aa22.28■■□□□ 1.16
XPA-202ENST00000462523 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
XPA-202ENST00000462523 CCPG1Q9ULG6 757 aa22.28■■□□□ 1.16
XPA-202ENST00000462523 IFNAR1P17181 557 aa22.27■■□□□ 1.16
XPA-202ENST00000462523 CCNA1P78396 465 aa22.27■■□□□ 1.16
XPA-202ENST00000462523 SHCBP1Q8NEM2 672 aa22.27■■□□□ 1.16
XPA-202ENST00000462523 CENPFP49454 3210 aa22.27■■□□□ 1.15
XPA-202ENST00000462523 PNMA6FA0A0J9YX94 578 aa22.26■■□□□ 1.15
XPA-202ENST00000462523 PSMC4P43686 418 aa22.26■■□□□ 1.15
XPA-202ENST00000462523 SLC4A3P48751 1232 aa22.26■■□□□ 1.15
XPA-202ENST00000462523 USH1GQ495M9 461 aa22.26■■□□□ 1.15
XPA-202ENST00000462523 NCAPG2Q86XI2 1143 aa22.26■■□□□ 1.15
XPA-202ENST00000462523 RRP36Q96EU6 259 aaKnown RBP22.26■■□□□ 1.15
XPA-202ENST00000462523 HOMER2Q9NSB8 354 aa22.26■■□□□ 1.15
XPA-202ENST00000462523 V9GY48 417 aaPredicted RBP22.26■■□□□ 1.15
XPA-202ENST00000462523 SLC25A27O95847 323 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 ALAS1P13196 640 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 MUM1L1Q5H9M0 696 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 GPR142Q7Z601 462 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 FBXO11Q86XK2 927 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 TMX3Q96JJ7 454 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 ZSCAN31Q96LW9 406 aaPredicted RBP22.25■■□□□ 1.15
XPA-202ENST00000462523 MAPK4P31152 587 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 PKN1Q16512 942 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 CLEC4DQ8WXI8 215 aa22.25■■□□□ 1.15
XPA-202ENST00000462523 RBBP6Q7Z6E9 1792 aaKnown RBP22.24■■□□□ 1.15
XPA-202ENST00000462523 ZNF236Q9UL36 1845 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 CCDC83Q8IWF9 413 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 ERO1AQ96HE7 468 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 TRERF1Q96PN7 1200 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 AMNQ9BXJ7 453 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 MROH8Q9H579 483 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 SH2B1Q9NRF2 756 aaPredicted RBP22.24■■□□□ 1.15
XPA-202ENST00000462523 RNF146Q9NTX7 359 aa22.24■■□□□ 1.15
XPA-202ENST00000462523 NFIBO00712 420 aa22.23■■□□□ 1.15
XPA-202ENST00000462523 CPLX1O14810 134 aa22.23■■□□□ 1.15
XPA-202ENST00000462523 OPLAHO14841 1288 aa22.23■■□□□ 1.15
XPA-202ENST00000462523 PRPF3O43395 683 aaKnown RBP22.23■■□□□ 1.15
XPA-202ENST00000462523 MCM2P49736 904 aa22.23■■□□□ 1.15
XPA-202ENST00000462523 FCGRTP55899 365 aa22.23■■□□□ 1.15
XPA-202ENST00000462523 WDR78Q5VTH9 848 aa22.23■■□□□ 1.15
XPA-202ENST00000462523 COA7Q96BR5 231 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms