RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 GBA2Q9HCG7 927 aaPredicted RBP22.84■■□□□ 1.25
PTPN18-207ENST00000462321 FBXO28Q9NVF7 368 aa22.84■■□□□ 1.25
PTPN18-207ENST00000462321 SMCO2A6NFE2 343 aa22.83■■□□□ 1.25
PTPN18-207ENST00000462321 FIBPO43427 364 aa22.83■■□□□ 1.25
PTPN18-207ENST00000462321 PPIL2Q13356 520 aa22.83■■□□□ 1.25
PTPN18-207ENST00000462321 PRPF38AQ8NAV1 312 aaKnown RBP22.83■■□□□ 1.25
PTPN18-207ENST00000462321 OTUD5Q96G74 571 aa22.83■■□□□ 1.25
PTPN18-207ENST00000462321 TRAF1Q13077 416 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 FBXO11Q86XK2 927 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 BICD2Q8TD16 824 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 GDPD2Q9HCC8 539 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-207ENST00000462321 PCDHA1Q9Y5I3 950 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 M0R2N6 131 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 CXCL11O14625 94 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 CELF2O95319 508 aaKnown RBP22.82■■□□□ 1.24
PTPN18-207ENST00000462321 ITGBL1O95965 494 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-207ENST00000462321 SNAP25P60880 206 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 USP28Q96RU2 1077 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 TFIP11Q9UBB9 837 aaKnown RBP22.82■■□□□ 1.24
PTPN18-207ENST00000462321 PPP1R9AQ9ULJ8 1098 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 KCNH4Q9UQ05 1017 aa22.82■■□□□ 1.24
PTPN18-207ENST00000462321 MYH15Q9Y2K3 1946 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 A0A0G2JLL6 359 aaPredicted RBP22.81■■□□□ 1.24
PTPN18-207ENST00000462321 IRF6O14896 467 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 FLOT1O75955 427 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 ADCY7P51828 1080 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 RILPL1Q5EBL4 403 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 PRRT2Q7Z6L0 340 aaPredicted RBP22.81■■□□□ 1.24
PTPN18-207ENST00000462321 C2orf69Q8N8R5 385 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 OPTNQ96CV9 577 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 LMBRD1Q9NUN5 540 aa22.81■■□□□ 1.24
PTPN18-207ENST00000462321 ELP1O95163 1332 aa22.8■■□□□ 1.24
PTPN18-207ENST00000462321 GLT8D2Q9H1C3 349 aa22.8■■□□□ 1.24
PTPN18-207ENST00000462321 GPBP1L1Q9HC44 474 aaPredicted RBP22.8■■□□□ 1.24
PTPN18-207ENST00000462321 POLR3EQ9NVU0 708 aa22.8■■□□□ 1.24
PTPN18-207ENST00000462321 RTEL1Q9NZ71 1219 aa22.8■■□□□ 1.24
PTPN18-207ENST00000462321 ADAMTS3O15072 1205 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 PRPF40AO75400 957 aaKnown RBP22.79■■□□□ 1.24
PTPN18-207ENST00000462321 FDX1P10109 184 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 LEO1Q8WVC0 666 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-207ENST00000462321 SPATA32Q96LK8 384 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 RIC8AQ9NPQ8 531 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 PCDHA6Q9UN73 950 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 PCDHA8Q9Y5H6 950 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 NBR1Q14596 966 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 EARS2Q5JPH6 523 aaKnown RBP22.79■■□□□ 1.24
PTPN18-207ENST00000462321 PROCA1Q8NCQ7 364 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-207ENST00000462321 CUL5Q93034 780 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 SLC10A4Q96EP9 437 aa22.79■■□□□ 1.24
PTPN18-207ENST00000462321 FTOQ9C0B1 505 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L15C9J2P7 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L13C9JLJ4 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L11C9JVI0 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L18D6R9N7 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L22D6RA61 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L17D6RBQ6 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L19D6RCP7 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L20D6RJB6 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 NASPP49321 788 aaPredicted RBP22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USP17L24Q0WX57 530 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 USH1GQ495M9 461 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 SAMD1Q6SPF0 538 aaPredicted RBP22.78■■□□□ 1.24
PTPN18-207ENST00000462321 CATSPERGQ6ZRH7 1159 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 REXO1Q8N1G1 1221 aaKnown RBP22.78■■□□□ 1.24
PTPN18-207ENST00000462321 SLC38A10Q9HBR0 1119 aa22.78■■□□□ 1.24
PTPN18-207ENST00000462321 NOL7Q9UMY1 257 aaKnown RBP22.78■■□□□ 1.24
PTPN18-207ENST00000462321 MYPNQ86TC9 1320 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 CCDC194A0A1B0GVG4 234 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 YEATS4O95619 227 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 TRAPPC10P48553 1259 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 MRPL12P52815 198 aaKnown RBP22.77■■□□□ 1.24
PTPN18-207ENST00000462321 CEBPZQ03701 1054 aaKnown RBP22.77■■□□□ 1.24
PTPN18-207ENST00000462321 ANO1Q5XXA6 986 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 CCDC174Q6PII3 467 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 PIK3AP1Q6ZUJ8 805 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 KRT25Q7Z3Z0 450 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 RASGRP4Q8TDF6 673 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 PSTPIP2Q9H939 334 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 RCOR1Q9UKL0 485 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 CLIC4Q9Y696 253 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 LOC285556D6RIA3 1793 aa22.77■■□□□ 1.24
PTPN18-207ENST00000462321 FAM205CA6NFA0 338 aa22.77■■□□□ 1.23
PTPN18-207ENST00000462321 ICAM1P05362 532 aa22.77■■□□□ 1.23
PTPN18-207ENST00000462321 TOB1P50616 345 aaPredicted RBP22.77■■□□□ 1.23
PTPN18-207ENST00000462321 TEX2Q8IWB9 1127 aa22.77■■□□□ 1.23
PTPN18-207ENST00000462321 PNMA2Q9UL42 364 aa22.77■■□□□ 1.23
PTPN18-207ENST00000462321 PTPRFP10586 1907 aa22.76■■□□□ 1.23
PTPN18-207ENST00000462321 DSG3P32926 999 aa22.76■■□□□ 1.23
PTPN18-207ENST00000462321 GJA5P36382 358 aa22.76■■□□□ 1.23
PTPN18-207ENST00000462321 COG2Q14746 738 aa22.76■■□□□ 1.23
PTPN18-207ENST00000462321 NOM1Q5C9Z4 860 aaKnown RBP22.76■■□□□ 1.23
PTPN18-207ENST00000462321 CST9Q5W186 159 aa22.76■■□□□ 1.23
PTPN18-207ENST00000462321 ZNF536O15090 1300 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 VWA5AO00534 786 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 ZBED4O75132 1171 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 CLK2P49760 499 aaKnown RBP22.75■■□□□ 1.23
PTPN18-207ENST00000462321 TREML2Q5T2D2 321 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 GADL1Q6ZQY3 521 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 LINC00301Q8NCQ3 95 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms