RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 PIGSQ96S52 555 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 CCL15-CCL14A0A0B4J2E2 113 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 RASSF10A6NK89 507 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 VWA5AO00534 786 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 SREBF2Q12772 1141 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 NOGQ13253 232 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 MOGSQ13724 837 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 CDC37Q16543 378 aaPredicted RBP12.3□□□□□ -0.44
RTF1-202ENST00000462276 CCL15Q16663 113 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 SAMD3Q8N6K7 520 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 BICD2Q8TD16 824 aa12.3□□□□□ -0.44
RTF1-202ENST00000462276 ICAM1P05362 532 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 COPB2P35606 906 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 GCLCP48506 637 aaPredicted RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 QRICH1Q2TAL8 776 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 TKFCQ3LXA3 575 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 ZMYND12Q9H0C1 365 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 CPVLQ9H3G5 476 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 FBXO28Q9NVF7 368 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 MRPL11Q9Y3B7 192 aaKnown RBP12.29□□□□□ -0.44
RTF1-202ENST00000462276 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
RTF1-202ENST00000462276 STXBP3O00186 592 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 BRD1O95696 1058 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 ZSCAN22P10073 491 aaPredicted RBP12.28□□□□□ -0.44
RTF1-202ENST00000462276 NAPAP54920 295 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 NLRP5P59047 1200 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 KRT40Q6A162 431 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 WWC2Q6AWC2 1192 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 DAGLBQ8NCG7 672 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
RTF1-202ENST00000462276 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 FOXP1Q9H334 677 aaPredicted RBP12.28□□□□□ -0.44
RTF1-202ENST00000462276 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 MYH8P13535 1937 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 ABCB11O95342 1321 aa12.28□□□□□ -0.44
RTF1-202ENST00000462276 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
RTF1-202ENST00000462276 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
RTF1-202ENST00000462276 BTBD19C9JJ37 291 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 PDHXO00330 501 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 ALDH1A1P00352 501 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 MMP1P03956 469 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 TM4SF4P48230 202 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 HERVK_113P62684 666 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 BRAPQ7Z569 592 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 MCF2L2Q86YR7 1114 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 PIBF1Q8WXW3 757 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
RTF1-202ENST00000462276 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 VPS54Q9P1Q0 977 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 PCDHA4Q9UN74 947 aa12.27□□□□□ -0.45
RTF1-202ENST00000462276 hCG_1642624A0A1W2PR95 340 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 VPS37CA5D8V6 355 aaPredicted RBP12.26□□□□□ -0.45
RTF1-202ENST00000462276 SMCO2A6NFE2 343 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 PPFIA3O75145 1194 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 SLC25A27O95847 323 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 U2AF2P26368 475 aaKnown RBP eCLIP12.26□□□□□ -0.45
RTF1-202ENST00000462276 KRT2P35908 639 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 MAP2K2P36507 400 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 STAT3P40763 770 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 ADCY7P51828 1080 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 DGKZQ13574 1117 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 ATL3Q6DD88 541 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 REPS2Q8NFH8 660 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 CUL5Q93034 780 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 RIC8AQ9NPQ8 531 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 FBXO40Q9UH90 709 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 CCPG1Q9ULG6 757 aa12.26□□□□□ -0.45
RTF1-202ENST00000462276 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
RTF1-202ENST00000462276 PPP1R11O60927 126 aaPredicted RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 FOSP01100 380 aaPredicted RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 CCNA1P78396 465 aa12.25□□□□□ -0.45
RTF1-202ENST00000462276 GHRHRQ02643 423 aa12.25□□□□□ -0.45
RTF1-202ENST00000462276 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 GNL2Q13823 731 aaKnown RBP12.25□□□□□ -0.45
RTF1-202ENST00000462276 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms