RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ARL6IP4Q66PJ3 421 aaKnown RBP20.67■□□□□ 0.9
HPS3-204ENST00000462030 CAGE1Q8TC20 777 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 ZNF384Q8TF68 577 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 BRIP1Q9BX63 1249 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 THAP9Q9H5L6 903 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 USP17L12C9JPN9 530 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 USP17L21D6R901 530 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 FGRP09769 529 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 C2orf54Q08AI8 447 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 HINFPQ9BQA5 517 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 SELENOOQ9BVL4 669 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 ABCA3Q99758 1704 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 A0A1B0GUL6 1792 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 AGPSO00116 658 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 MAGEA9P43362 315 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 NOP2P46087 812 aaKnown RBP20.66■□□□□ 0.9
HPS3-204ENST00000462030 CCDC152Q4G0S7 254 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 RASSF8Q8NHQ8 419 aa20.66■□□□□ 0.9
HPS3-204ENST00000462030 NHEJ1Q9H9Q4 299 aaPredicted RBP20.66■□□□□ 0.9
HPS3-204ENST00000462030 MACROD2A1Z1Q3 448 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 PPFIA4O75335 1185 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 SRGNP10124 158 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 TRIM21P19474 475 aaKnown RBP20.65■□□□□ 0.9
HPS3-204ENST00000462030 EIF5P55010 431 aaKnown RBP20.65■□□□□ 0.9
HPS3-204ENST00000462030 CYP27A1Q02318 531 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 TTI2Q6NXR4 508 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 ZNF662Q6ZS27 426 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 EHBP1Q8NDI1 1231 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 LRRC15Q8TF66 581 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 GPKOWQ92917 476 aaPredicted RBP eCLIP20.65■□□□□ 0.9
HPS3-204ENST00000462030 RPGRIP1Q96KN7 1286 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 MAGEC2Q9UBF1 373 aaPredicted RBP20.65■□□□□ 0.9
HPS3-204ENST00000462030 CYLC1P35663 651 aaPredicted RBP20.65■□□□□ 0.9
HPS3-204ENST00000462030 DNM2P50570 870 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
HPS3-204ENST00000462030 TUBGCP2Q9BSJ2 902 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.65■□□□□ 0.9
HPS3-204ENST00000462030 ZNF804BA4D1E1 1349 aa20.65■□□□□ 0.9
HPS3-204ENST00000462030 IDEP14735 1019 aa20.64■□□□□ 0.9
HPS3-204ENST00000462030 SKIDA1Q1XH10 827 aa20.64■□□□□ 0.9
HPS3-204ENST00000462030 CCNI2Q6ZMN8 369 aaPredicted RBP20.64■□□□□ 0.9
HPS3-204ENST00000462030 BLIDQ8IZY5 108 aa20.64■□□□□ 0.9
HPS3-204ENST00000462030 DUSP9Q99956 384 aaKnown RBP20.64■□□□□ 0.9
HPS3-204ENST00000462030 TMEM60Q9H2L4 133 aa20.64■□□□□ 0.9
HPS3-204ENST00000462030 EXOC1Q9NV70 894 aa20.64■□□□□ 0.9
HPS3-204ENST00000462030 PSMA7O14818 248 aa20.64■□□□□ 0.89
HPS3-204ENST00000462030 CORO7P57737 925 aa20.64■□□□□ 0.89
HPS3-204ENST00000462030 KCNB1Q14721 858 aa20.64■□□□□ 0.89
HPS3-204ENST00000462030 PACS2Q86VP3 889 aa20.64■□□□□ 0.89
HPS3-204ENST00000462030 CRACR2AQ9BSW2 395 aa20.64■□□□□ 0.89
HPS3-204ENST00000462030 JADE2Q9NQC1 790 aa20.64■□□□□ 0.89
HPS3-204ENST00000462030 GIMAP8Q8ND71 665 aaPredicted RBP20.63■□□□□ 0.89
HPS3-204ENST00000462030 EFCC1Q9HA90 598 aa20.63■□□□□ 0.89
HPS3-204ENST00000462030 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
HPS3-204ENST00000462030 NKRFO15226 690 aaKnown RBP eCLIP20.63■□□□□ 0.89
HPS3-204ENST00000462030 RHOBTB3O94955 611 aa20.63■□□□□ 0.89
HPS3-204ENST00000462030 CSGALNACT2Q8N6G5 542 aa20.63■□□□□ 0.89
HPS3-204ENST00000462030 SMCR8Q8TEV9 937 aaPredicted RBP20.63■□□□□ 0.89
HPS3-204ENST00000462030 PURBQ96QR8 312 aaKnown RBP20.63■□□□□ 0.89
HPS3-204ENST00000462030 ANO9A1A5B4 782 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
HPS3-204ENST00000462030 DTHD1Q6ZMT9 781 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 IPO4Q8TEX9 1081 aaKnown RBP20.62■□□□□ 0.89
HPS3-204ENST00000462030 ZNHIT6Q9NWK9 470 aaKnown RBP20.62■□□□□ 0.89
HPS3-204ENST00000462030 ZNF263O14978 683 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 IPO7O95373 1038 aaKnown RBP20.62■□□□□ 0.89
HPS3-204ENST00000462030 CYP2D6P10635 497 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 PCP11498 1178 aaKnown RBP20.62■□□□□ 0.89
HPS3-204ENST00000462030 TBC1D8BQ0IIM8 1120 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 TYW1BQ6NUM6 668 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 PLCD3Q8N3E9 789 aa20.62■□□□□ 0.89
HPS3-204ENST00000462030 ZBED6P86452 979 aa20.61■□□□□ 0.89
HPS3-204ENST00000462030 KRT26Q7Z3Y9 468 aa20.61■□□□□ 0.89
HPS3-204ENST00000462030 CNOT6LQ96LI5 555 aaKnown RBP20.61■□□□□ 0.89
HPS3-204ENST00000462030 PCMTD1Q96MG8 357 aaPredicted RBP20.61■□□□□ 0.89
HPS3-204ENST00000462030 KBTBD4Q9NVX7 518 aa20.61■□□□□ 0.89
HPS3-204ENST00000462030 LRWD1Q9UFC0 647 aa20.61■□□□□ 0.89
HPS3-204ENST00000462030 PLEKP08567 350 aaPredicted RBP20.61■□□□□ 0.89
HPS3-204ENST00000462030 TTC31Q49AM3 519 aaPredicted RBP20.61■□□□□ 0.89
HPS3-204ENST00000462030 CCDC170Q8IYT3 715 aa20.61■□□□□ 0.89
HPS3-204ENST00000462030 PCDHA4Q9UN74 947 aa20.61■□□□□ 0.89
HPS3-204ENST00000462030 MYH1P12882 1939 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 TAF1P21675 1872 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 ORC4O43929 436 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 CALML3P27482 149 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 UBA7P41226 1012 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 AENQ8WTP8 325 aaKnown RBP20.6■□□□□ 0.89
HPS3-204ENST00000462030 HDAC7Q8WUI4 952 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 SECISBP2LQ93073 1101 aaKnown RBP20.6■□□□□ 0.89
HPS3-204ENST00000462030 KAT14Q9H8E8 782 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 CAPN6Q9Y6Q1 641 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 RREB1Q92766 1687 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 GOLGA6BA6NDN3 693 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 SHOX2O60902 331 aaPredicted RBP20.6■□□□□ 0.89
HPS3-204ENST00000462030 NTSR2O95665 410 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 VAV2P52735 878 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 MRPS25P82663 173 aaKnown RBP20.6■□□□□ 0.89
HPS3-204ENST00000462030 SLC4A8Q2Y0W8 1093 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 FAM76AQ8TAV0 307 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms