RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ACVR2BQ13705 512 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 CCSAPQ6IQ19 270 aaPredicted RBP21.17■□□□□ 0.98
SSB-206ENST00000461708 RCSD1Q6JBY9 416 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 CCDC129Q6ZRS4 1044 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 Q7L0L9 218 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 NUP133Q8WUM0 1156 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 TRIM43Q96BQ3 446 aaPredicted RBP21.17■□□□□ 0.98
SSB-206ENST00000461708 ACAD9Q9H845 621 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 PRDM5Q9NQX1 630 aaPredicted RBP21.17■□□□□ 0.98
SSB-206ENST00000461708 IL17RBQ9NRM6 502 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.17■□□□□ 0.98
SSB-206ENST00000461708 STX8Q9UNK0 236 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 SYNRGQ9UMZ2 1314 aa21.17■□□□□ 0.98
SSB-206ENST00000461708 ZNF536O15090 1300 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 KIAA0355O15063 1070 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 CLTBP09497 229 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 MCCP23508 829 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 ANKRD33Q7Z3H0 272 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 FAM133AQ8N9E0 248 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 SLC17A8Q8NDX2 589 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 BADQ92934 168 aa21.16■□□□□ 0.98
SSB-206ENST00000461708 ZHX1Q9UKY1 873 aaPredicted RBP21.16■□□□□ 0.98
SSB-206ENST00000461708 ZMYM6O95789 1325 aa21.15■□□□□ 0.98
SSB-206ENST00000461708 NKX3-2P78367 333 aa21.15■□□□□ 0.98
SSB-206ENST00000461708 ARMCX2Q7L311 632 aa21.15■□□□□ 0.98
SSB-206ENST00000461708 SH3RF1Q7Z6J0 888 aa21.15■□□□□ 0.98
SSB-206ENST00000461708 LENG1Q96BZ8 264 aaPredicted RBP21.15■□□□□ 0.98
SSB-206ENST00000461708 UPF3AQ9H1J1 476 aaKnown RBP21.15■□□□□ 0.98
SSB-206ENST00000461708 ELP1O95163 1332 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 GJA9P57773 515 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 IKQ13123 557 aaPredicted RBP21.14■□□□□ 0.97
SSB-206ENST00000461708 SHHQ15465 462 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 CCDC144BQ3MJ40 725 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 MCMDC2Q4G0Z9 681 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 VPS53Q5VIR6 699 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 PCSK9Q8NBP7 692 aaKnown RBP21.14■□□□□ 0.97
SSB-206ENST00000461708 KATNBL1Q9H079 304 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 SPC25Q9HBM1 224 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 A1CFQ9NQ94 594 aaKnown RBP21.14■□□□□ 0.97
SSB-206ENST00000461708 STARD7Q9NQZ5 370 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 RNF146Q9NTX7 359 aa21.14■□□□□ 0.97
SSB-206ENST00000461708 RANBP6O60518 1105 aaKnown RBP21.13■□□□□ 0.97
SSB-206ENST00000461708 NMT2O60551 498 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 KCNA10Q16322 511 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 CCDC144CPQ8IYA2 1237 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 DCAF4Q8WV16 495 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 AGBL1Q96MI9 1066 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 HOMER2Q9NSB8 354 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 PRR12Q9ULL5 1215 aa21.13■□□□□ 0.97
SSB-206ENST00000461708 ISY1Q9ULR0 285 aaKnown RBP21.13■□□□□ 0.97
SSB-206ENST00000461708 ASB14A6NK59 587 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 DCDC2CA8MYV0 355 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 FGAP02671 866 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 PCP11498 1178 aaKnown RBP21.12■□□□□ 0.97
SSB-206ENST00000461708 GLT1D1Q96MS3 346 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 TRERF1Q96PN7 1200 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 INCENPQ9NQS7 918 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 TCP11L1Q9NUJ3 509 aa21.12■□□□□ 0.97
SSB-206ENST00000461708 MROH7Q68CQ1 1323 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 A0A0D9SFI3 127 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 PQBP1O60828 265 aaKnown RBP21.11■□□□□ 0.97
SSB-206ENST00000461708 SMAD3P84022 425 aaKnown RBP21.11■□□□□ 0.97
SSB-206ENST00000461708 CNTN2Q02246 1040 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 FAAP100Q0VG06 881 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 C9orf50Q5SZB4 431 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 BTNL9Q6UXG8 535 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 KCTD1Q719H9 257 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 TMEM39AQ9NV64 488 aa21.11■□□□□ 0.97
SSB-206ENST00000461708 ADCY6O43306 1168 aa21.1■□□□□ 0.97
SSB-206ENST00000461708 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
SSB-206ENST00000461708 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
SSB-206ENST00000461708 TOP1P11387 765 aaKnown RBP21.1■□□□□ 0.97
SSB-206ENST00000461708 RAG1P15918 1043 aa21.1■□□□□ 0.97
SSB-206ENST00000461708 ITGB8P26012 769 aa21.1■□□□□ 0.97
SSB-206ENST00000461708 CDK7P50613 346 aa21.1■□□□□ 0.97
SSB-206ENST00000461708 MYADML2A6NDP7 307 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 SOWAHBA6NEL2 793 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 ICAM1P05362 532 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 ALAS1P13196 640 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 NT5C2P49902 561 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 RWDD1Q9H446 243 aaPredicted RBP21.09■□□□□ 0.97
SSB-206ENST00000461708 CYP39A1Q9NYL5 469 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 PNMA2Q9UL42 364 aa21.09■□□□□ 0.97
SSB-206ENST00000461708 LOC102724159A0A0B4J2E5 919 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 CTAGE5O15320 804 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 ASGR1P07306 291 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 MFAP1P55081 439 aaKnown RBP21.08■□□□□ 0.97
SSB-206ENST00000461708 PWP2Q15269 919 aaKnown RBP21.08■□□□□ 0.97
SSB-206ENST00000461708 GNASQ5JWF2 1037 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 ZNF697Q5TEC3 545 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 TTC14Q96N46 770 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 GUCD1Q96NT3 240 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 RANBP17Q9H2T7 1088 aaKnown RBP21.08■□□□□ 0.97
SSB-206ENST00000461708 OSBPL3Q9H4L5 887 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 TBX21Q9UL17 535 aa21.08■□□□□ 0.97
SSB-206ENST00000461708 CCDC171Q6TFL3 1326 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms