RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 PALM3A6NDB9 673 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-206ENST00000461574 TCP10L2B9ZVM9 353 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 ATP9BO43861 1147 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 DKK1O94907 266 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 H2AFB2P0C5Z0 115 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 CETPP11597 493 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 GNAI1P63096 354 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 LACTBP83111 547 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-206ENST00000461574 CAP1Q01518 475 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 VGLL4Q14135 290 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 RALBP1Q15311 655 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 KSR2Q6VAB6 950 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 FAM43AQ8N2R8 423 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 PI4KAP1Q8N8J0 262 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 PRMT6Q96LA8 375 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-206ENST00000461574 ARHGAP39Q9C0H5 1083 aa6.4□□□□□ -1.38
BRCA1-206ENST00000461574 LAMA2P24043 3122 aaKnown RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 MYH13Q9UKX3 1938 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 PLIN1O60240 522 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 TLR2O60603 784 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 TAF5LO75529 589 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 IGKV5-2P06315 115 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 HOXD10P28358 340 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 GRK4P32298 578 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 AFF1P51825 1210 aaKnown RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 FKBP1AP62942 108 aaKnown RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 UBXN2AP68543 259 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 SNAPC2Q13487 334 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 PSAPL1Q6NUJ1 521 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 SIX5Q8N196 739 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 LENG1Q96BZ8 264 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 C2orf49Q9BVC5 232 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 GSX2Q9BZM3 304 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 RNF208Q9H0X6 261 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 MYH16Q9H6N6 1097 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 TDRD3Q9H7E2 651 aaKnown RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 IFT57Q9NWB7 429 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 DNAJB12Q9NXW2 375 aaKnown RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 TMOD2Q9NZR1 351 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 ZNF70Q9UC06 446 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 NAGPAQ9UK23 515 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 TTF2Q9UNY4 1162 aaKnown RBP6.39□□□□□ -1.39
BRCA1-206ENST00000461574 MYPNQ86TC9 1320 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 LAMA3Q16787 3333 aa6.39□□□□□ -1.39
BRCA1-206ENST00000461574 SNAP23O00161 211 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 RAD21O60216 631 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 FRAT2O75474 233 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 FARP2O94887 1054 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 CCL5P13501 91 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 IL1R1P14778 569 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 PSMC4P43686 418 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 GJA8P48165 433 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 RAC1P63000 192 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 IFIT5Q13325 482 aaKnown RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 MFSD14BQ5SR56 506 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 ERO1BQ86YB8 467 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 DMRTC2Q8IXT2 367 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 C8orf58Q8NAV2 365 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 SCG3Q8WXD2 468 aaKnown RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 SHISA4Q96DD7 197 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 WRNIP1Q96S55 665 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 TMEM39BQ9GZU3 492 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 ZCCHC17Q9NP64 241 aaKnown RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 CNNM1Q9NRU3 951 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 CPA4Q9UI42 421 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 SERPINA10Q9UK55 444 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 RIPOR2Q9Y4F9 1068 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 AOX1Q06278 1338 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 MYBBP1AQ9BQG0 1328 aaKnown RBP6.38□□□□□ -1.39
BRCA1-206ENST00000461574 CACNA1FO60840 1977 aa6.38□□□□□ -1.39
BRCA1-206ENST00000461574 A0A1W2PPC1 479 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 BTBD19C9JJ37 291 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 GJB1P08034 283 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 CRKP46108 304 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 NRG1Q02297 640 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-206ENST00000461574 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-206ENST00000461574 GCKRQ14397 625 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 C15orf52Q6ZUT6 534 aaKnown RBP6.37□□□□□ -1.39
BRCA1-206ENST00000461574 VPS37DQ86XT2 251 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 DZIP1LQ8IYY4 767 aaKnown RBP6.37□□□□□ -1.39
BRCA1-206ENST00000461574 FMR1NBQ8N0W7 255 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-206ENST00000461574 STAG2Q8N3U4 1231 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 ZKSCAN4Q969J2 545 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-206ENST00000461574 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 SRRDQ9UH36 339 aa6.37□□□□□ -1.39
BRCA1-206ENST00000461574 DNAH12Q6ZR08 3092 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 PDHXO00330 501 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 TFRCP02786 760 aaKnown RBP6.36□□□□□ -1.39
BRCA1-206ENST00000461574 NFKB1P19838 968 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 CACNB3P54284 484 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 FCGRTP55899 365 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 PPIL2Q13356 520 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 CCDC57Q2TAC2 916 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 DCAF15Q66K64 600 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms