RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SHISA4Q96DD7 197 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 GMLQ99445 158 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 TMEM39BQ9GZU3 492 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 NAT10Q9H0A0 1025 aaKnown RBP7.75□□□□□ -1.17
MSH2-204ENST00000461394 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 DNAJC18Q9H819 358 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.75□□□□□ -1.17
MSH2-204ENST00000461394 ANO10Q9NW15 660 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 NYAP2Q9P242 653 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 FBXO2Q9UK22 296 aaPredicted RBP7.75□□□□□ -1.17
MSH2-204ENST00000461394 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
MSH2-204ENST00000461394 PNMA6FA0A0J9YX94 578 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 VWA3AA6NCI4 1184 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 BECN2A8MW95 431 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 USP17L10C9JJH3 530 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 BIN1O00499 593 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 PTPREP23469 700 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 TXLNAP40222 546 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 NOVP48745 357 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 GMPSP49915 693 aaPredicted RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 TPM4P67936 248 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 TNFAIP1Q13829 316 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 INF2Q27J81 1249 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 SHROOM1Q2M3G4 852 aaPredicted RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 NBPF9Q3BBW0 867 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 JAKMIP3Q5VZ66 844 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 TATDN1Q6P1N9 297 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 MIGA2Q7L4E1 593 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 MICALL2Q8IY33 904 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 CEP57L1Q8IYX8 460 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 ADGRF4Q8IZF3 695 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 FAM177A1Q8N128 213 aaPredicted RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 REXO1Q8N1G1 1221 aaKnown RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 PDILTQ8N807 584 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 DAGLBQ8NCG7 672 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 NLGN2Q8NFZ4 835 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 ERCC4Q92889 916 aaPredicted RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 FERMT2Q96AC1 680 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 COA7Q96BR5 231 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 MS4A4AQ96JQ5 239 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 FUCA2Q9BTY2 467 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 RIOX1Q9H6W3 641 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 SPON1Q9HCB6 807 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 BIN2Q9UBW5 565 aaPredicted RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 PCDHA6Q9UN73 950 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 PCDHA8Q9Y5H6 950 aa7.74□□□□□ -1.17
MSH2-204ENST00000461394 SRPRBQ9Y5M8 271 aaKnown RBP7.74□□□□□ -1.17
MSH2-204ENST00000461394 CNTNAP1P78357 1384 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 SHTN1A0MZ66 631 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 F5H6K3 240 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 H7C1D1 291 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 WNT10BO00744 389 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 GPR37O15354 613 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 POLR2DO15514 142 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 MARCH6O60337 910 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 CCNT1O60563 726 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 CAVIN2O95810 425 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 SNHG28P0DPA3 235 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 BMP3P12645 472 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 ZNF165P49910 485 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 KLRC3Q07444 240 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 PTGDRQ13258 359 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 ZYXQ15942 572 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 SLC35G1Q2M3R5 365 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 KIF4BQ2VIQ3 1234 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 LETM2Q2VYF4 491 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 TBC1D10BQ4KMP7 808 aaPredicted RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 FKBP1CQ5VVH2 108 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 ISM2Q6H9L7 571 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 CHADLQ6NUI6 762 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 PPP1R18Q6NYC8 613 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 KRBA2Q6ZNG9 492 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 RBM43Q6ZSC3 357 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 FAM83AQ86UY5 434 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 LUZP1Q86V48 1076 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 MTMR14Q8NCE2 650 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 CUL5Q93034 780 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 TNFRSF25Q93038 417 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 CCDC102AQ96A19 550 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 DHX58Q96C10 678 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 TIGD1Q96MW7 591 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 NUP88Q99567 741 aaPredicted RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 FEZ1Q99689 392 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 ZMYND12Q9H0C1 365 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 SH2D4AQ9H788 454 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 JMJD4Q9H9V9 463 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 CBX8Q9HC52 389 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 TMEM260Q9NX78 707 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 USP25Q9UHP3 1055 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 SERTAD1Q9UHV2 236 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 CNOT7Q9UIV1 285 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 SCAF8Q9UPN6 1271 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 DICER1Q9UPY3 1922 aaKnown RBP7.73□□□□□ -1.17
MSH2-204ENST00000461394 LTBP3Q9NS15 1303 aa7.73□□□□□ -1.17
MSH2-204ENST00000461394 TMEM232C9JQI7 657 aa7.72□□□□□ -1.17
MSH2-204ENST00000461394 DPYSL4O14531 572 aa7.72□□□□□ -1.17
MSH2-204ENST00000461394 IRF6O14896 467 aa7.72□□□□□ -1.17
MSH2-204ENST00000461394 ZBTB5O15062 677 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms