RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 MTMR4Q9NYA4 1195 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 ZHX1Q9UKY1 873 aaPredicted RBP17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 RIPK3Q9Y572 518 aa17.38■□□□□ 0.37
DNMT3A-207ENST00000461228 KCNA10Q16322 511 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 TJAP1Q5JTD0 557 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 AKNAD1Q5T1N1 836 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 ARMCX2Q7L311 632 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 TIFAQ96CG3 184 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 GMCL1Q96IK5 515 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
DNMT3A-207ENST00000461228 MYO9BQ13459 2157 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 REV3LO60673 3130 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 LOC102724159A0A0B4J2E5 919 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 ARVCFO00192 962 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 TLR3O15455 904 aaKnown RBP17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 GPAA1O43292 621 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 ASGR1P07306 291 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 C6orf222P0C671 652 aaPredicted RBP17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 STAT2P52630 851 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 PWP2Q15269 919 aaKnown RBP17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 CCDC144BQ3MJ40 725 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 FAM133AQ8N9E0 248 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 SLC43A3Q8NBI5 491 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 CEP95Q96GE4 821 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.36■□□□□ 0.372e-7■■□□□ 12.3
DNMT3A-207ENST00000461228 MTIF3Q9H2K0 278 aaKnown RBP17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 ACAD9Q9H845 621 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 PRDM6Q9NQX0 595 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 SCN10AQ9Y5Y9 1956 aa17.36■□□□□ 0.37
DNMT3A-207ENST00000461228 MYADML2A6NDP7 307 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 CTAGE5O15320 804 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 ADCY6O43306 1168 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 CD4P01730 458 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 CHGBP05060 677 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 RAB30Q15771 203 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 FAM160B2Q86V87 743 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 ANKRD35Q8N283 1001 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 OSBP2Q969R2 916 aa17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 NUP88Q99567 741 aaPredicted RBP17.35■□□□□ 0.37
DNMT3A-207ENST00000461228 ASB14A6NK59 587 aa17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 GRIN2CQ14957 1233 aa17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 TMEM240Q5SV17 173 aa17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 TTC41PQ6P2S7 1318 aa17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 Q9Y3F1 56 aa17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 CTDP1Q9Y5B0 961 aaPredicted RBP17.34■□□□□ 0.37
DNMT3A-207ENST00000461228 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 BMP3P12645 472 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 TDO2P48775 406 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 PDE4BQ07343 736 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 CCDC144CPQ8IYA2 1237 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 ATXN2LQ8WWM7 1075 aaKnown RBP17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 HERVK_113Q902F9 699 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 PBX4Q9BYU1 374 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 A1CFQ9NQ94 594 aaKnown RBP17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 CLIP2Q9UDT6 1046 aa17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
DNMT3A-207ENST00000461228 ZNF536O15090 1300 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 RAD21O60216 631 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 SLC3A2P08195 630 aaKnown RBP17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 PFKMP08237 780 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 ZNF444Q8N0Y2 327 aaPredicted RBP17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 CHURC1Q8WUH1 139 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 GAS2L1Q99501 681 aaPredicted RBP17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 RAVER2Q9HCJ3 691 aaKnown RBP17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 LAMA4Q16363 1823 aa17.32■□□□□ 0.36
DNMT3A-207ENST00000461228 NOVP48745 357 aa17.31■□□□□ 0.36
DNMT3A-207ENST00000461228 GNASQ5JWF2 1037 aa17.31■□□□□ 0.36
DNMT3A-207ENST00000461228 C16orf59Q7L2K0 433 aa17.31■□□□□ 0.36
DNMT3A-207ENST00000461228 TLK2Q86UE8 772 aa17.31■□□□□ 0.36
DNMT3A-207ENST00000461228 CPXCR1Q8N123 301 aa17.31■□□□□ 0.36
DNMT3A-207ENST00000461228 MINDY4BA8MYZ0 360 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 CSF2RAP15509 400 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 SLFN13Q68D06 897 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 LRRC47Q8N1G4 583 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 USP38Q8NB14 1042 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 VTA1Q9NP79 307 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 RNF146Q9NTX7 359 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 THEGQ9P2T0 379 aa17.3■□□□□ 0.36
DNMT3A-207ENST00000461228 ASTN1O14525 1302 aa17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 ERC2O15083 957 aa17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 ZEB2O60315 1214 aa17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms