RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ACVR2BQ13705 512 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 GMCL1Q96IK5 515 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 INCENPQ9NQS7 918 aa17.46■□□□□ 0.39
SMPD4-216ENST00000461187 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-216ENST00000461187 ZNF536O15090 1300 aa17.46■□□□□ 0.38
SMPD4-216ENST00000461187 MYADML2A6NDP7 307 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 MOXD2PA6NHM9 499 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
SMPD4-216ENST00000461187 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
SMPD4-216ENST00000461187 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 KCNA10Q16322 511 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 CHURC1Q8WUH1 139 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 STAG1Q8WVM7 1258 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 ABHD16BQ9H3Z7 469 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 STARD7Q9NQZ5 370 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 HOMER2Q9NSB8 354 aa17.45■□□□□ 0.38
SMPD4-216ENST00000461187 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 PLA2G6O60733 806 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 MCCP23508 829 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 CST5P28325 142 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-216ENST00000461187 IRX5P78411 483 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-216ENST00000461187 FAAP100Q0VG06 881 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 ARMCX2Q7L311 632 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 ANKRD33Q7Z3H0 272 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 NUP133Q8WUM0 1156 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 TOX2Q96NM4 488 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 KATNBL1Q9H079 304 aa17.44■□□□□ 0.38
SMPD4-216ENST00000461187 UPF3AQ9H1J1 476 aaKnown RBP17.44■□□□□ 0.38
SMPD4-216ENST00000461187 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
SMPD4-216ENST00000461187 TSPY2A6NKD2 308 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 NMT2O60551 498 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 SLC1A4P43007 532 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 EPHB4P54760 987 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 ZNF697Q5TEC3 545 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 FAM133AQ8N9E0 248 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 ACAD9Q9H845 621 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 TMEM39AQ9NV64 488 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
SMPD4-216ENST00000461187 C6orf222P0C671 652 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-216ENST00000461187 RAG1P15918 1043 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 NOVP48745 357 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 GJA9P57773 515 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 SMAD3P84022 425 aaKnown RBP17.42■□□□□ 0.38
SMPD4-216ENST00000461187 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-216ENST00000461187 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 RASGRP2Q7LDG7 609 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 A1CFQ9NQ94 594 aaKnown RBP17.42■□□□□ 0.38
SMPD4-216ENST00000461187 RNF146Q9NTX7 359 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 ELP1O95163 1332 aa17.42■□□□□ 0.38
SMPD4-216ENST00000461187 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 DCDC2CA8MYV0 355 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 ORC4O43929 436 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
SMPD4-216ENST00000461187 ASGR1P07306 291 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 CDK7P50613 346 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 PDE1AP54750 535 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 ALX1Q15699 326 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 PCSK9Q8NBP7 692 aaKnown RBP17.41■□□□□ 0.38
SMPD4-216ENST00000461187 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-216ENST00000461187 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
SMPD4-216ENST00000461187 CTAGE5O15320 804 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 FGRP09769 529 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 ALAS1P13196 640 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 SNAP25P60880 206 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 NKX3-2P78367 333 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 FPGSQ05932 587 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-216ENST00000461187 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 GLT1D1Q96MS3 346 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 SEMA6BQ9H3T3 888 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 SPC25Q9HBM1 224 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 KIAA1217Q5T5P2 1943 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 ASTN1O14525 1302 aa17.4■□□□□ 0.38
SMPD4-216ENST00000461187 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-216ENST00000461187 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-216ENST00000461187 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
SMPD4-216ENST00000461187 GNASQ5JWF2 1037 aa17.39■□□□□ 0.37
SMPD4-216ENST00000461187 RNPC3Q96LT9 517 aaKnown RBP17.39■□□□□ 0.37
SMPD4-216ENST00000461187 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
SMPD4-216ENST00000461187 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-216ENST00000461187 TTYH1Q9H313 450 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms