RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 CEP57L1Q8IYX8 460 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 GMCL1P1Q8NEA9 526 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 DCAF4Q8WV16 495 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
IFT88-204ENST00000461115 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 TDRD3Q9H7E2 651 aaKnown RBP12.4□□□□□ -0.42
IFT88-204ENST00000461115 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 CNTNAP1P78357 1384 aa12.4□□□□□ -0.43
IFT88-204ENST00000461115 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 POLD1P28340 1107 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 CACNB3P54284 484 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 PTGDRQ13258 359 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 RASGRP2Q7LDG7 609 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 PLA2G4DQ86XP0 818 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 DHX40Q8IX18 779 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 PIGSQ96S52 555 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 PYM1Q9BRP8 204 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 JMJD4Q9H9V9 463 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 C6orf50Q9HD87 102 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
IFT88-204ENST00000461115 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
IFT88-204ENST00000461115 IKBKBO14920 756 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 CDC25BP30305 580 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 CLCN1P35523 988 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 LONP1P36776 959 aaKnown RBP12.38□□□□□ -0.43
IFT88-204ENST00000461115 RBM5P52756 815 aaKnown RBP eCLIP12.38□□□□□ -0.43
IFT88-204ENST00000461115 ZNF174Q15697 407 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 E2F4Q16254 413 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 HEATR3Q7Z4Q2 680 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 NIM1KQ8IY84 436 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
IFT88-204ENST00000461115 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
IFT88-204ENST00000461115 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
IFT88-204ENST00000461115 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
IFT88-204ENST00000461115 CCDC194A0A1B0GVG4 234 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 SMCO2A6NFE2 343 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
IFT88-204ENST00000461115 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
IFT88-204ENST00000461115 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
IFT88-204ENST00000461115 NAPAP54920 295 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
IFT88-204ENST00000461115 CXCL9Q07325 125 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 TCP10Q12799 353 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 IL17AQ16552 155 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 USP49Q70CQ1 688 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 ADGRF4Q8IZF3 695 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 CNNM3Q8NE01 707 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 GLT8D2Q9H1C3 349 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
IFT88-204ENST00000461115 TMOD2Q9NZR1 351 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 NFKBIEO00221 500 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 ZBTB5O15062 677 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 MYO1BO43795 1136 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 RAD17O75943 681 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 TPM3P06753 285 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 SEMA3FQ13275 785 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 NCAPHQ15003 741 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 NONOQ15233 471 aaKnown RBP eCLIP12.37□□□□□ -0.43
IFT88-204ENST00000461115 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 DPCR1Q3MIW9 517 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
IFT88-204ENST00000461115 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 UBA5Q9GZZ9 404 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 CPVLQ9H3G5 476 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 SERTAD1Q9UHV2 236 aa12.37□□□□□ -0.43
IFT88-204ENST00000461115 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 A0A087X0B3 334 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
IFT88-204ENST00000461115 ZNF500O60304 480 aaPredicted RBP12.36□□□□□ -0.43
IFT88-204ENST00000461115 ZBTB7AO95365 584 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 ZNF75DP51815 510 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 MORC3Q14149 939 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 RRP1BQ14684 758 aaKnown RBP12.36□□□□□ -0.43
IFT88-204ENST00000461115 SEPT2Q15019 361 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 POSTNQ15063 836 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 AK8Q96MA6 479 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 CSRNP1Q96S65 589 aa12.36□□□□□ -0.43
IFT88-204ENST00000461115 CCSER1Q9C0I3 900 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms