RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 CHRNA5P30532 468 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 IFIT5Q13325 482 aaKnown RBP7□□□□□ -1.29
PTPN12-209ENST00000460731 DUOXA2Q1HG44 320 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 NFXL1Q6ZNB6 911 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 DDX46Q7L014 1031 aaKnown RBP7□□□□□ -1.29
PTPN12-209ENST00000460731 ATG9AQ7Z3C6 839 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 SP8Q8IXZ3 490 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 TTLL6Q8N841 843 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 CELF1Q92879 486 aaKnown RBP7□□□□□ -1.29
PTPN12-209ENST00000460731 VTI1AQ96AJ9 217 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
PTPN12-209ENST00000460731 KRTAP4-2Q9BYR5 136 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 LACRTQ9GZZ8 138 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 DCTPP1Q9H773 170 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7□□□□□ -1.292e-8■■■■■ 129.5
PTPN12-209ENST00000460731 PODXL2Q9NZ53 605 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 PIM2Q9P1W9 311 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 ATP6V0A2Q9Y487 856 aa7□□□□□ -1.29
PTPN12-209ENST00000460731 SLX4Q8IY92 1834 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 ANKRD18BA2A2Z9 1011 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 EYA2O00167 538 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 DDX3YO15523 660 aaKnown RBP6.99□□□□□ -1.29
PTPN12-209ENST00000460731 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 KIF4AO95239 1232 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 BMP3P12645 472 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 EPHA1P21709 976 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 CCDC57Q2TAC2 916 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 FAM26DQ5JW98 314 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 CEP135Q66GS9 1140 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 OGFOD2Q6N063 350 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 BEND4Q6ZU67 534 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 C15orf52Q6ZUT6 534 aaKnown RBP6.99□□□□□ -1.29
PTPN12-209ENST00000460731 VGLL2Q8N8G2 317 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 NLGN2Q8NFZ4 835 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 UBASH3BQ8TF42 649 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 RPGRQ92834 1020 aaKnown RBP6.99□□□□□ -1.29
PTPN12-209ENST00000460731 COL26A1Q96A83 441 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 RTFDC1Q9BY42 306 aaPredicted RBP6.99□□□□□ -1.29
PTPN12-209ENST00000460731 MINPP1Q9UNW1 487 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 COL4A1P02462 1669 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 IRS2Q9Y4H2 1338 aa6.99□□□□□ -1.29
PTPN12-209ENST00000460731 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
PTPN12-209ENST00000460731 NPHP1O15259 732 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 HMMRO75330 724 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 SMNDC1O75940 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
PTPN12-209ENST00000460731 PREPP48147 710 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 HYAL2Q12891 473 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 MSMPQ1L6U9 139 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 DALRD3Q5D0E6 543 aaKnown RBP6.98□□□□□ -1.29
PTPN12-209ENST00000460731 ANKRD34AQ69YU3 496 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
PTPN12-209ENST00000460731 ANKRD18AQ8IVF6 992 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 SMC5Q8IY18 1101 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 POU5F2Q8N7G0 328 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 KLHDC7BQ96G42 594 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 ADAM19Q9H013 955 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 VPS33BQ9H267 617 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 RASSF4Q9H2L5 321 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 C1orf115Q9H7X2 142 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 GPR108Q9NPR9 543 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 HIF3AQ9Y2N7 669 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 UTRNP46939 3433 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 TAF1P21675 1872 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 LTBP3Q9NS15 1303 aa6.98□□□□□ -1.29
PTPN12-209ENST00000460731 LRRC37AA6NMS7 1700 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 WDR64B1ANS9 1081 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 RAB11FIP3O75154 756 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 SASH1O94885 1247 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 IGHDP01880 384 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 PRNPP04156 253 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 FGFR2P21802 821 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 IL15P40933 162 aaPredicted RBP6.97□□□□□ -1.29
PTPN12-209ENST00000460731 LTBP1Q14766 1721 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 HSP90AB4PQ58FF6 505 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 SOGA3Q5TF21 947 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 LDHAL6AQ6ZMR3 332 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 PSMD1Q99460 953 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 PUS3Q9BZE2 481 aaKnown RBP6.97□□□□□ -1.29
PTPN12-209ENST00000460731 VRTNQ9H8Y1 702 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 MROH5Q6ZUA9 1318 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 ARFGEF1Q9Y6D6 1849 aa6.97□□□□□ -1.29
PTPN12-209ENST00000460731 PDE8BO95263 885 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 IGHMBP2P38935 993 aaKnown RBP6.96□□□□□ -1.3
PTPN12-209ENST00000460731 CHRNDQ07001 517 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 UBE4AQ14139 1066 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 LRRC24Q50LG9 513 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 RTKN2Q8IZC4 609 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 CEP120Q8N960 986 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 KLHDC4Q8TBB5 520 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 WNT8BQ93098 351 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 ZNF622Q969S3 477 aaKnown RBP eCLIP6.96□□□□□ -1.38e-12■■■□□ 14.8
PTPN12-209ENST00000460731 GCC1Q96CN9 775 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 PBX4Q9BYU1 374 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 ANKRD2Q9GZV1 360 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 RWDD1Q9H446 243 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-209ENST00000460731 PPP1R1BQ9UD71 204 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-209ENST00000460731 PA2G4Q9UQ80 394 aaKnown RBP6.96□□□□□ -1.3
PTPN12-209ENST00000460731 LEMD3Q9Y2U8 911 aa6.96□□□□□ -1.3
PTPN12-209ENST00000460731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms