RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TRIM60Q495X7 471 aa26.93■■□□□ 1.9
PTPN4-207ENST00000460162 ZNF589Q86UQ0 364 aaPredicted RBP26.93■■□□□ 1.9
PTPN4-207ENST00000460162 CHD1LQ86WJ1 897 aa26.93■■□□□ 1.9
PTPN4-207ENST00000460162 ZHX1Q9UKY1 873 aaPredicted RBP26.93■■□□□ 1.9
PTPN4-207ENST00000460162 ZNF536O15090 1300 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 ADAMTS4O75173 837 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 TKFCQ3LXA3 575 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 RCSD1Q6JBY9 416 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 FERMT2Q96AC1 680 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 LENG1Q96BZ8 264 aaPredicted RBP26.92■■□□□ 1.9
PTPN4-207ENST00000460162 FGD4Q96M96 766 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 OSBPL3Q9H4L5 887 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 TOMM22Q9NS69 142 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 HOMER2Q9NSB8 354 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 FAM184BQ9ULE4 1060 aa26.92■■□□□ 1.9
PTPN4-207ENST00000460162 SYNRGQ9UMZ2 1314 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 PCP11498 1178 aaKnown RBP26.91■■□□□ 1.9
PTPN4-207ENST00000460162 MFAP1P55081 439 aaKnown RBP26.91■■□□□ 1.9
PTPN4-207ENST00000460162 NUCB1Q02818 461 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 B4GALNT3Q6L9W6 998 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 KCTD1Q719H9 257 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 DCAF4Q8WV16 495 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 RILPL2Q969X0 211 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 RNF146Q9NTX7 359 aa26.91■■□□□ 1.9
PTPN4-207ENST00000460162 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.91■■□□□ 1.9
PTPN4-207ENST00000460162 RASGRP2Q7LDG7 609 aa26.9■■□□□ 1.9
PTPN4-207ENST00000460162 TSEN34Q9BSV6 310 aaKnown RBP26.9■■□□□ 1.9
PTPN4-207ENST00000460162 ABHD16BQ9H3Z7 469 aa26.9■■□□□ 1.9
PTPN4-207ENST00000460162 PRR12Q9ULL5 1215 aa26.9■■□□□ 1.9
PTPN4-207ENST00000460162 A0A1W2PQ45 241 aaPredicted RBP26.89■■□□□ 1.9
PTPN4-207ENST00000460162 A0A1W2PQY0 241 aa26.89■■□□□ 1.9
PTPN4-207ENST00000460162 RRP12Q5JTH9 1297 aaKnown RBP26.89■■□□□ 1.9
PTPN4-207ENST00000460162 ARMCX2Q7L311 632 aa26.89■■□□□ 1.9
PTPN4-207ENST00000460162 PLEKHM2Q8IWE5 1019 aa26.89■■□□□ 1.9
PTPN4-207ENST00000460162 AGBL1Q96MI9 1066 aa26.89■■□□□ 1.9
PTPN4-207ENST00000460162 A1CFQ9NQ94 594 aaKnown RBP26.89■■□□□ 1.9
PTPN4-207ENST00000460162 PRDM5Q9NQX1 630 aaPredicted RBP26.89■■□□□ 1.9
PTPN4-207ENST00000460162 PDLIM7Q9NR12 457 aa26.89■■□□□ 1.9
PTPN4-207ENST00000460162 TCP11L1Q9NUJ3 509 aa26.89■■□□□ 1.9
PTPN4-207ENST00000460162 DUSP11O75319 330 aaKnown RBP26.88■■□□□ 1.89
PTPN4-207ENST00000460162 IGHDP01880 384 aa26.88■■□□□ 1.89
PTPN4-207ENST00000460162 TOP1P11387 765 aaKnown RBP26.88■■□□□ 1.89
PTPN4-207ENST00000460162 ACVR2BQ13705 512 aa26.88■■□□□ 1.89
PTPN4-207ENST00000460162 CCDC96Q2M329 555 aa26.88■■□□□ 1.89
PTPN4-207ENST00000460162 FAM133AQ8N9E0 248 aa26.88■■□□□ 1.89
PTPN4-207ENST00000460162 EXOC6Q8TAG9 804 aa26.88■■□□□ 1.89
PTPN4-207ENST00000460162 CHMP4CQ96CF2 233 aa26.88■■□□□ 1.89
PTPN4-207ENST00000460162 LCTP09848 1927 aa26.87■■□□□ 1.89
PTPN4-207ENST00000460162 MOXD2PA6NHM9 499 aa26.87■■□□□ 1.89
PTPN4-207ENST00000460162 POTEB2H3BUK9 544 aa26.87■■□□□ 1.89
PTPN4-207ENST00000460162 SDSP20132 328 aa26.87■■□□□ 1.89
PTPN4-207ENST00000460162 ALAS1P13196 640 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 CST5P28325 142 aaPredicted RBP26.86■■□□□ 1.89
PTPN4-207ENST00000460162 HAND2P61296 217 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 AKNAD1Q5T1N1 836 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 CCDC174Q6PII3 467 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 CCDC144CPQ8IYA2 1237 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 KLHDC9Q8NEP7 349 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 TRERF1Q96PN7 1200 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 RNF41Q9H4P4 317 aaPredicted RBP26.86■■□□□ 1.89
PTPN4-207ENST00000460162 MTMR7Q9Y216 660 aa26.86■■□□□ 1.89
PTPN4-207ENST00000460162 ACLYP53396 1101 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 CNTN2Q02246 1040 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 TLE2Q04725 743 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 CCDC144BQ3MJ40 725 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 BTNL9Q6UXG8 535 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 MFSD6Q6ZSS7 791 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 TBC1D10CQ8IV04 446 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 NUP133Q8WUM0 1156 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 TMEM47Q9BQJ4 181 aa26.85■■□□□ 1.89
PTPN4-207ENST00000460162 RANBP17Q9H2T7 1088 aaKnown RBP26.85■■□□□ 1.89
PTPN4-207ENST00000460162 ICAM1P05362 532 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 NT5C2P49902 561 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 CCSAPQ6IQ19 270 aaPredicted RBP26.84■■□□□ 1.89
PTPN4-207ENST00000460162 KATNBL1Q9H079 304 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 UPF3AQ9H1J1 476 aaKnown RBP26.84■■□□□ 1.89
PTPN4-207ENST00000460162 SPC25Q9HBM1 224 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 STARD7Q9NQZ5 370 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 DIAPH3Q9NSV4 1193 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 CCPG1Q9ULG6 757 aa26.84■■□□□ 1.89
PTPN4-207ENST00000460162 ASB14A6NK59 587 aa26.83■■□□□ 1.89
PTPN4-207ENST00000460162 HIP1O00291 1037 aa26.83■■□□□ 1.89
PTPN4-207ENST00000460162 ADCY6O43306 1168 aa26.83■■□□□ 1.89
PTPN4-207ENST00000460162 CLTBP09497 229 aa26.83■■□□□ 1.89
PTPN4-207ENST00000460162 TTC14Q96N46 770 aa26.83■■□□□ 1.89
PTPN4-207ENST00000460162 SNAP25P60880 206 aa26.82■■□□□ 1.88
PTPN4-207ENST00000460162 SYDE2Q5VT97 1194 aa26.82■■□□□ 1.88
PTPN4-207ENST00000460162 SH3RF1Q7Z6J0 888 aa26.82■■□□□ 1.88
PTPN4-207ENST00000460162 DEFB123Q8N688 67 aa26.82■■□□□ 1.88
PTPN4-207ENST00000460162 PCSK9Q8NBP7 692 aaKnown RBP26.82■■□□□ 1.88
PTPN4-207ENST00000460162 CYP39A1Q9NYL5 469 aa26.82■■□□□ 1.88
PTPN4-207ENST00000460162 TRIM43BA6NCK2 446 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 MYADML2A6NDP7 307 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 SOWAHBA6NEL2 793 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 C6orf222P0C671 652 aaPredicted RBP26.81■■□□□ 1.88
PTPN4-207ENST00000460162 PDHBP11177 359 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 GJA9P57773 515 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 KCNA10Q16322 511 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 MUM1L1Q5H9M0 696 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 ANKRD33Q7Z3H0 272 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms