RNA–Protein interactions for RNA: ENST00000460123.1

GRIA3-201, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2

Gene GRIA3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-201ENST00000460123 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
GRIA3-201ENST00000460123 KCNG4Q8TDN1 519 aa13.1□□□□□ -0.31
GRIA3-201ENST00000460123 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
GRIA3-201ENST00000460123 FTOQ9C0B1 505 aaKnown RBP eCLIP13.1□□□□□ -0.31
GRIA3-201ENST00000460123 PRR12Q9ULL5 1215 aa13.1□□□□□ -0.31
GRIA3-201ENST00000460123 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
GRIA3-201ENST00000460123 CSADQ9Y600 493 aa13.1□□□□□ -0.31
GRIA3-201ENST00000460123 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
GRIA3-201ENST00000460123 GOLGA6L4A6NEF3 574 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 PPP1R11O60927 126 aaPredicted RBP13.09□□□□□ -0.31
GRIA3-201ENST00000460123 TRAPPC10P48553 1259 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 ADCY7P51828 1080 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 BACE1P56817 501 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 TRAF1Q13077 416 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 SPP2Q13103 211 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 MTMR2Q13614 643 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 PRKG1Q13976 671 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
GRIA3-201ENST00000460123 MAP3K11Q16584 847 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 COA7Q96BR5 231 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
GRIA3-201ENST00000460123 PCDHA6Q9UN73 950 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 PCDHA8Q9Y5H6 950 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 SNCAIPQ9Y6H5 919 aa13.09□□□□□ -0.31
GRIA3-201ENST00000460123 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 SPTLC2O15270 562 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 PPP6R2O75170 966 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 BMP15O95972 392 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
GRIA3-201ENST00000460123 VGLL4Q14135 290 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
GRIA3-201ENST00000460123 PIK3AP1Q6ZUJ8 805 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 ARMC9Q7Z3E5 817 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 KRT25Q7Z3Z0 450 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 JMYQ8N9B5 988 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 AMNQ9BXJ7 453 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 RIC8AQ9NPQ8 531 aa13.08□□□□□ -0.32
GRIA3-201ENST00000460123 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
GRIA3-201ENST00000460123 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 VCAM1P19320 739 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 SLC39A14Q15043 492 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 PTPAQ15257 358 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 EARS2Q5JPH6 523 aaKnown RBP13.07□□□□□ -0.32
GRIA3-201ENST00000460123 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 DLK2Q6UY11 383 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
GRIA3-201ENST00000460123 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 CUL5Q93034 780 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 SYAP1Q96A49 352 aaPredicted RBP13.07□□□□□ -0.32
GRIA3-201ENST00000460123 KIFC2Q96AC6 838 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 SLF1Q9BQI6 1058 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.07□□□□□ -0.32
GRIA3-201ENST00000460123 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 TMOD4Q9NZQ9 345 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
GRIA3-201ENST00000460123 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 FDX1P10109 184 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 ME1P48163 572 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
GRIA3-201ENST00000460123 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
GRIA3-201ENST00000460123 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
GRIA3-201ENST00000460123 PCDHB6Q9Y5E3 794 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 PCDHA1Q9Y5I3 950 aa13.06□□□□□ -0.32
GRIA3-201ENST00000460123 A0A1W2PQ27 194 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 A0A1W2PQ64 194 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 A0A1W2PQD8 194 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
GRIA3-201ENST00000460123 SNAP25P60880 206 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 PPATQ06203 517 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 NONOQ15233 471 aaKnown RBP eCLIP13.05□□□□□ -0.32
GRIA3-201ENST00000460123 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
GRIA3-201ENST00000460123 ADALQ6DHV7 355 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 MCTP2Q6DN12 878 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 CAVIN1Q6NZI2 390 aaKnown RBP13.05□□□□□ -0.32
GRIA3-201ENST00000460123 PRPF38AQ8NAV1 312 aaKnown RBP13.05□□□□□ -0.32
GRIA3-201ENST00000460123 TANGO6Q9C0B7 1094 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 RPAP3Q9H6T3 665 aaPredicted RBP13.05□□□□□ -0.32
GRIA3-201ENST00000460123 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 PPP1R9AQ9ULJ8 1098 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
GRIA3-201ENST00000460123 SPDYE5A6NIY4 337 aa13.04□□□□□ -0.32
GRIA3-201ENST00000460123 UNCXA6NJT0 531 aa13.04□□□□□ -0.32
GRIA3-201ENST00000460123 FLOT1O75955 427 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms