RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-202ENST00000460002 ID4P47928 161 aa16.51■□□□□ 0.23
PCOLCE-202ENST00000460002 ERVK-21P61565 698 aa16.51■□□□□ 0.23
PCOLCE-202ENST00000460002 ATOH1Q92858 354 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-202ENST00000460002 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-202ENST00000460002 AKAP2Q9Y2D5 859 aa16.51■□□□□ 0.23
PCOLCE-202ENST00000460002 CACNA1HO95180 2353 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 COL11A1P12107 1806 aaPredicted RBP16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 PARP14Q460N5 1801 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 TMEM221A6NGB7 291 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 M0R296 226 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 RGS20O76081 388 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 PTGS1P23219 599 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 PLCD1P51178 756 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 PKN1Q16512 942 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 REPS2Q8NFH8 660 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 FGD4Q96M96 766 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 SEZ6LQ9BYH1 1024 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 KATNBL1Q9H079 304 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 TRMT13Q9NUP7 481 aaKnown RBP16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 FAM50BQ9Y247 325 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 PLXNA3P51805 1871 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
PCOLCE-202ENST00000460002 VWA5AO00534 786 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 TRIM67Q6ZTA4 783 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 CLEC10AQ8IUN9 316 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 MYH1P12882 1939 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 PTPRSQ13332 1948 aa16.49■□□□□ 0.23
PCOLCE-202ENST00000460002 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 PROB1E7EW31 1015 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 RFC2P35250 354 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 COPB2P35606 906 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 USP5P45974 858 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 EVX2Q03828 476 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 WDR63Q8IWG1 891 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 FBXL6Q8N531 539 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
PCOLCE-202ENST00000460002 LINC01553A4QN01 128 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 VCPP55072 806 aaKnown RBP16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 GABPAQ06546 454 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 PABPC5Q96DU9 382 aaKnown RBP16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
PCOLCE-202ENST00000460002 TNKSO95271 1327 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 MED19A0JLT2 244 aaPredicted RBP16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 PRR23AA6NEV1 266 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 IQCF3P0C7M6 154 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 SUPT20HL2P0C7V6 817 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 DEFB103AP81534 67 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 EP400NLQ6ZTU2 488 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 MIGA1Q8NAN2 632 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 CACNA1GO43497 2377 aa16.46■□□□□ 0.23
PCOLCE-202ENST00000460002 H0Y858 1186 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 UQCRFS1P1P0C7P4 283 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 KCNJ6P48051 423 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 CCDC144CPQ8IYA2 1237 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 IRF2BPLQ9H1B7 796 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 TLR9Q9NR96 1032 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 PTPRCP08575 1304 aa16.45■□□□□ 0.22
PCOLCE-202ENST00000460002 EPG5Q9HCE0 2579 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 KMT2BQ9UMN6 2715 aaPredicted RBP16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 CYP7A1P22680 504 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 TCEAL5Q5H9L2 206 aa16.44■□□□□ 0.22
PCOLCE-202ENST00000460002 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms