RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ZNF213O14771 459 aa24.63■■□□□ 1.53
SRM-202ENST00000459997 ZNF865P0CJ78 1059 aaPredicted RBP24.63■■□□□ 1.53
SRM-202ENST00000459997 RARBP10826 455 aa24.63■■□□□ 1.53
SRM-202ENST00000459997 ATN1P54259 1190 aaPredicted RBP24.63■■□□□ 1.53
SRM-202ENST00000459997 SNAP25P60880 206 aa24.63■■□□□ 1.53
SRM-202ENST00000459997 CCDC174Q6PII3 467 aa24.63■■□□□ 1.53
SRM-202ENST00000459997 ACAD9Q9H845 621 aa24.63■■□□□ 1.53
SRM-202ENST00000459997 NEDD4P46934 1319 aa24.62■■□□□ 1.53
SRM-202ENST00000459997 LRRC41Q15345 812 aa24.62■■□□□ 1.53
SRM-202ENST00000459997 MAMDC4Q6UXC1 1216 aa24.62■■□□□ 1.53
SRM-202ENST00000459997 ZNF467Q7Z7K2 595 aaPredicted RBP24.62■■□□□ 1.53
SRM-202ENST00000459997 GDF15Q99988 308 aa24.62■■□□□ 1.53
SRM-202ENST00000459997 XPNPEP3Q9NQH7 507 aa24.62■■□□□ 1.53
SRM-202ENST00000459997 RNF146Q9NTX7 359 aa24.62■■□□□ 1.53
SRM-202ENST00000459997 AKR1A1P14550 325 aa24.61■■□□□ 1.53
SRM-202ENST00000459997 ESR2Q92731 530 aa24.61■■□□□ 1.53
SRM-202ENST00000459997 A0A1W2PPC1 479 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 SNAI1O95863 264 aaPredicted RBP24.6■■□□□ 1.53
SRM-202ENST00000459997 ALAS1P13196 640 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 MAGEA10P43363 369 aaPredicted RBP24.6■■□□□ 1.53
SRM-202ENST00000459997 TKFCQ3LXA3 575 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 TTC22Q5TAA0 569 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 TTBK2Q6IQ55 1244 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 LENG1Q96BZ8 264 aaPredicted RBP24.6■■□□□ 1.53
SRM-202ENST00000459997 FGD4Q96M96 766 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 TRERF1Q96PN7 1200 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 DSCC1Q9BVC3 393 aa24.6■■□□□ 1.53
SRM-202ENST00000459997 ZHX1Q9UKY1 873 aaPredicted RBP24.6■■□□□ 1.53
SRM-202ENST00000459997 FRMPD2Q68DX3 1309 aaPredicted RBP24.6■■□□□ 1.53
SRM-202ENST00000459997 SMCHD1A6NHR9 2005 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 PGK1P00558 417 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 GSPT1P15170 499 aaKnown RBP24.59■■□□□ 1.53
SRM-202ENST00000459997 SLC16A2P36021 539 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 ADCYAP1R1P41586 468 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 TTC14Q96N46 770 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 GPCPD1Q9NPB8 672 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 A1CFQ9NQ94 594 aaKnown RBP24.59■■□□□ 1.53
SRM-202ENST00000459997 PCDH10Q9P2E7 1040 aa24.59■■□□□ 1.53
SRM-202ENST00000459997 POTEB2H3BUK9 544 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 BMP8BP34820 402 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 RTP1P59025 263 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 CNTN2Q02246 1040 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 RNF180Q86T96 592 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 FERMT2Q96AC1 680 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 ZKSCAN3Q9BRR0 538 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.58■■□□□ 1.53
SRM-202ENST00000459997 FAM184BQ9ULE4 1060 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 CCPG1Q9ULG6 757 aa24.58■■□□□ 1.53
SRM-202ENST00000459997 PDHBP11177 359 aa24.57■■□□□ 1.52
SRM-202ENST00000459997 IMMTQ16891 758 aaKnown RBP24.57■■□□□ 1.52
SRM-202ENST00000459997 SYDE2Q5VT97 1194 aa24.57■■□□□ 1.52
SRM-202ENST00000459997 BTNL9Q6UXG8 535 aa24.57■■□□□ 1.52
SRM-202ENST00000459997 SLC39A5Q6ZMH5 540 aa24.57■■□□□ 1.52
SRM-202ENST00000459997 RANBP17Q9H2T7 1088 aaKnown RBP24.57■■□□□ 1.52
SRM-202ENST00000459997 CTNNA3Q9UI47 895 aa24.57■■□□□ 1.52
SRM-202ENST00000459997 ATP11BQ9Y2G3 1177 aa24.57■■□□□ 1.52
SRM-202ENST00000459997 KDM4AO75164 1064 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 ICAM1P05362 532 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 ACVR2BQ13705 512 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 MUM1L1Q5H9M0 696 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 ARMCX2Q7L311 632 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 FAM133AQ8N9E0 248 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 IL25Q9H293 177 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 PHF24Q9UPV7 400 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 MCM3APO60318 1980 aa24.56■■□□□ 1.52
SRM-202ENST00000459997 NT5C2P49902 561 aa24.55■■□□□ 1.52
SRM-202ENST00000459997 IQCA1Q86XH1 822 aa24.55■■□□□ 1.52
SRM-202ENST00000459997 CCDC144CPQ8IYA2 1237 aa24.55■■□□□ 1.52
SRM-202ENST00000459997 ABHD16BQ9H3Z7 469 aa24.55■■□□□ 1.52
SRM-202ENST00000459997 SYNRGQ9UMZ2 1314 aa24.55■■□□□ 1.52
SRM-202ENST00000459997 B4E1Z4 1266 aa24.54■■□□□ 1.52
SRM-202ENST00000459997 MDM2Q00987 491 aaPredicted RBP24.54■■□□□ 1.52
SRM-202ENST00000459997 ZNF543Q08ER8 600 aa24.54■■□□□ 1.52
SRM-202ENST00000459997 SNX17Q15036 470 aa24.54■■□□□ 1.52
SRM-202ENST00000459997 DGKHQ86XP1 1220 aa24.54■■□□□ 1.52
SRM-202ENST00000459997 UBE2OQ9C0C9 1292 aaKnown RBP24.54■■□□□ 1.52
SRM-202ENST00000459997 SOWAHBA6NEL2 793 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 ADAMTS4O75173 837 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 SNHG28P0DPA3 235 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 CCDC144BQ3MJ40 725 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 TRIM60Q495X7 471 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 CCDC178Q5BJE1 867 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 NSMFQ6X4W1 530 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 CYP39A1Q9NYL5 469 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 PRKAG2Q9UGJ0 569 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 RAD50Q92878 1312 aa24.53■■□□□ 1.52
SRM-202ENST00000459997 DUSP11O75319 330 aaKnown RBP24.52■■□□□ 1.52
SRM-202ENST00000459997 LBHD1Q9BQE6 289 aaPredicted RBP24.52■■□□□ 1.52
SRM-202ENST00000459997 A0A1W2PQ45 241 aaPredicted RBP24.51■■□□□ 1.51
SRM-202ENST00000459997 A0A1W2PQY0 241 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 ASB14A6NK59 587 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 ADCY6O43306 1168 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 PNMA1Q8ND90 353 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 RUFY2Q8WXA3 655 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 ZSCAN10Q96SZ4 725 aaPredicted RBP24.51■■□□□ 1.51
SRM-202ENST00000459997 KRT23Q9C075 422 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 KATNBL1Q9H079 304 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 KAT14Q9H8E8 782 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 CNNM2Q9H8M5 875 aa24.51■■□□□ 1.51
SRM-202ENST00000459997 LRRC37A2A6NM11 1700 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms