RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 GMCL1P1Q8NEA9 526 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 MAFAQ8NHW3 353 aaPredicted RBP14.7□□□□□ -0.06
GPNMB-204ENST00000459927 VTI1AQ96AJ9 217 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 GLT1D1Q96MS3 346 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
GPNMB-204ENST00000459927 ROBO3Q96MS0 1386 aa14.7□□□□□ -0.06
GPNMB-204ENST00000459927 GREB1LQ9C091 1923 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-204ENST00000459927 ADCY6O43306 1168 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 C6orf222P0C671 652 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-204ENST00000459927 TFAP4Q01664 338 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 MFSD5Q6N075 450 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 CHURC1Q8WUH1 139 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 GPATCH3Q96I76 525 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 KATNBL1Q9H079 304 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 UPF3AQ9H1J1 476 aaKnown RBP14.69□□□□□ -0.06
GPNMB-204ENST00000459927 SPC25Q9HBM1 224 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 TBX21Q9UL17 535 aa14.69□□□□□ -0.06
GPNMB-204ENST00000459927 TMEM265A0A087WTH1 108 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 TMEM232C9JQI7 657 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 ARVCFO00192 962 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 CTAGE5O15320 804 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 TSPY3P0CV98 308 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 TSPY8P0CW00 308 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 NKX3-2P78367 333 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 CNTN2Q02246 1040 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 PDE4BQ07343 736 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 GRIN2CQ14957 1233 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 LRRFIP1Q32MZ4 808 aaKnown RBP14.68□□□□□ -0.06
GPNMB-204ENST00000459927 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 LRRC47Q8N1G4 583 aaKnown RBP14.68□□□□□ -0.06
GPNMB-204ENST00000459927 STAG1Q8WVM7 1258 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.68□□□□□ -0.06
GPNMB-204ENST00000459927 NACAP1Q9BZK3 213 aa14.68□□□□□ -0.06
GPNMB-204ENST00000459927 SOWAHBA6NEL2 793 aa14.67□□□□□ -0.06
GPNMB-204ENST00000459927 SLC3A2P08195 630 aaKnown RBP14.67□□□□□ -0.06
GPNMB-204ENST00000459927 MCCP23508 829 aa14.67□□□□□ -0.06
GPNMB-204ENST00000459927 TMEM240Q5SV17 173 aa14.67□□□□□ -0.06
GPNMB-204ENST00000459927 FAM133AQ8N9E0 248 aa14.67□□□□□ -0.06
GPNMB-204ENST00000459927 AGBL1Q96MI9 1066 aa14.67□□□□□ -0.06
GPNMB-204ENST00000459927 INCENPQ9NQS7 918 aa14.67□□□□□ -0.06
GPNMB-204ENST00000459927 ZNF536O15090 1300 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 PLA2G6O60733 806 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 FOSL2P15408 326 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 TNFAIP2Q03169 654 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 PPARAQ07869 468 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 ZMYM1Q5SVZ6 1142 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 RCSD1Q6JBY9 416 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 FAM160B2Q86V87 743 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 TRERF1Q96PN7 1200 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 ZNF576Q9H609 170 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 IL17RBQ9NRM6 502 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 HOMER2Q9NSB8 354 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 MYH4Q9Y623 1939 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 TTC41PQ6P2S7 1318 aa14.66□□□□□ -0.06
GPNMB-204ENST00000459927 A0A0U1RQG5 324 aaPredicted RBP14.65□□□□□ -0.06
GPNMB-204ENST00000459927 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.65□□□□□ -0.06
GPNMB-204ENST00000459927 ASB14A6NK59 587 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 ERC2O15083 957 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 CD4P01730 458 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 CSF2RAP15509 400 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 DNAJB2P25686 324 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 SLC1A4P43007 532 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 STAT2P52630 851 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 PPIGQ13427 754 aaKnown RBP eCLIP14.65□□□□□ -0.06
GPNMB-204ENST00000459927 TKFCQ3LXA3 575 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 RASIP1Q5U651 963 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 FAM126BQ8IXS8 530 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 TMEM199Q8N511 208 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 SLC43A3Q8NBI5 491 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 PI4K2BQ8TCG2 481 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 CHMP4CQ96CF2 233 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 GMCL1Q96IK5 515 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 NAPBQ9H115 298 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 GNEQ9Y223 722 aaKnown RBP14.65□□□□□ -0.06
GPNMB-204ENST00000459927 PCDHB15Q9Y5E8 787 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 MCM3APO60318 1980 aa14.65□□□□□ -0.06
GPNMB-204ENST00000459927 GRXCR1A8MXD5 290 aa14.64□□□□□ -0.07
GPNMB-204ENST00000459927 TLR3O15455 904 aaKnown RBP14.64□□□□□ -0.07
GPNMB-204ENST00000459927 BEX3Q00994 111 aa14.64□□□□□ -0.07
GPNMB-204ENST00000459927 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
GPNMB-204ENST00000459927 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
GPNMB-204ENST00000459927 A1CFQ9NQ94 594 aaKnown RBP14.64□□□□□ -0.07
GPNMB-204ENST00000459927 RNF146Q9NTX7 359 aa14.64□□□□□ -0.07
GPNMB-204ENST00000459927 ASTN1O14525 1302 aa14.64□□□□□ -0.07
GPNMB-204ENST00000459927 EYSQ5T1H1 3165 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 DYNC1LI2O43237 492 aaPredicted RBP14.63□□□□□ -0.07
GPNMB-204ENST00000459927 ACRP10323 421 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 ALAS1P13196 640 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 SNAP25P60880 206 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 TAPT1Q6NXT6 567 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 CCDC174Q6PII3 467 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 CXCL17Q6UXB2 119 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 KCTD1Q719H9 257 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 OTUD7AQ8TE49 926 aaPredicted RBP14.63□□□□□ -0.07
GPNMB-204ENST00000459927 TIFAQ96CG3 184 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms