RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 MAMDC4Q6UXC1 1216 aa18■□□□□ 0.47
LMNA-209ENST00000459904 ZNF444Q8N0Y2 327 aaPredicted RBP18■□□□□ 0.47
LMNA-209ENST00000459904 ANKRD35Q8N283 1001 aa18■□□□□ 0.47
LMNA-209ENST00000459904 PPM1EQ8WY54 764 aa18■□□□□ 0.47
LMNA-209ENST00000459904 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
LMNA-209ENST00000459904 SLC38A10Q9HBR0 1119 aa18■□□□□ 0.47
LMNA-209ENST00000459904 MTMR4Q9NYA4 1195 aa18■□□□□ 0.47
LMNA-209ENST00000459904 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
LMNA-209ENST00000459904 SYNGAP1Q96PV0 1343 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 DCDC2CA8MYV0 355 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 CSF2RAP15509 400 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 DNAJB2P25686 324 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 SLFN13Q68D06 897 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 ARMCX2Q7L311 632 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 ANKRD33Q7Z3H0 272 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 CCDC144CPQ8IYA2 1237 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 IFNL3Q8IZI9 196 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 PURBQ96QR8 312 aaKnown RBP17.99■□□□□ 0.47
LMNA-209ENST00000459904 TSEN34Q9BSV6 310 aaKnown RBP17.99■□□□□ 0.47
LMNA-209ENST00000459904 TBX21Q9UL17 535 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 TTC28Q96AY4 2481 aa17.99■□□□□ 0.47
LMNA-209ENST00000459904 ASTN1O14525 1302 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 CTAGE5O15320 804 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 DUSP11O75319 330 aaKnown RBP17.98■□□□□ 0.47
LMNA-209ENST00000459904 TIMP1P01033 207 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 CYP2C18P33260 490 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 COPB2P35606 906 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 KATNBL1Q9H079 304 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
LMNA-209ENST00000459904 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 NMT2O60551 498 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 CDK7P50613 346 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 TFAP4Q01664 338 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 CTDSPL2Q05D32 466 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 GNASQ5JWF2 1037 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 TMEM240Q5SV17 173 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 CCDC174Q6PII3 467 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 EEPD1Q7L9B9 569 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 PDGFCQ9NRA1 345 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 FEM1BQ9UK73 627 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 TRIP12Q14669 1992 aaPredicted RBP17.97■□□□□ 0.47
LMNA-209ENST00000459904 ZNF536O15090 1300 aa17.97■□□□□ 0.47
LMNA-209ENST00000459904 PATL2C9JE40 543 aaKnown RBP17.96■□□□□ 0.47
LMNA-209ENST00000459904 ATP2A1O14983 1001 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 BMP3P12645 472 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 MCCP23508 829 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 IKQ13123 557 aaPredicted RBP17.96■□□□□ 0.47
LMNA-209ENST00000459904 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 GIMAP6Q6P9H5 292 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 ZNF365Q70YC5 407 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 KCTD1Q719H9 257 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
LMNA-209ENST00000459904 PPP1R13LQ8WUF5 828 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 MKL1Q969V6 931 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 UPF3AQ9H1J1 476 aaKnown RBP17.96■□□□□ 0.47
LMNA-209ENST00000459904 ZNF576Q9H609 170 aa17.96■□□□□ 0.47
LMNA-209ENST00000459904 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.95■□□□□ 0.46
LMNA-209ENST00000459904 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.95■□□□□ 0.46
LMNA-209ENST00000459904 ARVCFO00192 962 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 TTLL1O95922 423 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 ALAS1P13196 640 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 GJA9P57773 515 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 MFSD5Q6N075 450 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 MSL3Q8N5Y2 521 aaKnown RBP17.95■□□□□ 0.46
LMNA-209ENST00000459904 TIFAQ96CG3 184 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 ABHD16BQ9H3Z7 469 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 PRDM12Q9H4Q4 367 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 DCTPP1Q9H773 170 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 A1CFQ9NQ94 594 aaKnown RBP17.95■□□□□ 0.46
LMNA-209ENST00000459904 RNF146Q9NTX7 359 aa17.95■□□□□ 0.46
LMNA-209ENST00000459904 FOXP2O15409 715 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 CST5P28325 142 aaPredicted RBP17.94■□□□□ 0.46
LMNA-209ENST00000459904 PSMC6P62333 389 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 ZNF467Q7Z7K2 595 aaPredicted RBP17.94■□□□□ 0.46
LMNA-209ENST00000459904 FAM126BQ8IXS8 530 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 CHST13Q8NET6 341 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 NEDD1Q8NHV4 660 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 PBX4Q9BYU1 374 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 CXXC1Q9P0U4 656 aaPredicted RBP17.94■□□□□ 0.46
LMNA-209ENST00000459904 MUC3AQ02505 3323 aa17.94■□□□□ 0.46
LMNA-209ENST00000459904 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
LMNA-209ENST00000459904 CCL23P55773 120 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 TNFAIP2Q03169 654 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 PPARAQ07869 468 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 CCDC85BQ15834 202 aaPredicted RBP17.93■□□□□ 0.46
LMNA-209ENST00000459904 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
LMNA-209ENST00000459904 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 GMCL1P1Q8NEA9 526 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 PI4K2BQ8TCG2 481 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 FSD1Q9BTV5 496 aa17.93■□□□□ 0.46
LMNA-209ENST00000459904 ACAD9Q9H845 621 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms