RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 NEDD1Q8NHV4 660 aa31.4■■■□□ 2.62
PBRM1-218ENST00000458294 MYLIPQ8WY64 445 aa31.4■■■□□ 2.62
PBRM1-218ENST00000458294 FGD4Q96M96 766 aa31.4■■■□□ 2.62
PBRM1-218ENST00000458294 MYADML2A6NDP7 307 aa31.39■■■□□ 2.62
PBRM1-218ENST00000458294 C6orf222P0C671 652 aaPredicted RBP31.39■■■□□ 2.62
PBRM1-218ENST00000458294 BMP3P12645 472 aa31.39■■■□□ 2.62
PBRM1-218ENST00000458294 PDE4BQ07343 736 aa31.39■■■□□ 2.62
PBRM1-218ENST00000458294 SLFN13Q68D06 897 aa31.39■■■□□ 2.62
PBRM1-218ENST00000458294 UPF3AQ9H1J1 476 aaKnown RBP31.39■■■□□ 2.62
PBRM1-218ENST00000458294 TTC41PQ6P2S7 1318 aa31.39■■■□□ 2.62
PBRM1-218ENST00000458294 MCM3APO60318 1980 aa31.39■■■□□ 2.62
PBRM1-218ENST00000458294 TIMP1P01033 207 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 TSPY3P0CV98 308 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 TSPY8P0CW00 308 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 GJA9P57773 515 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 CCDC144BQ3MJ40 725 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 ARMCX2Q7L311 632 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 TBX21Q9UL17 535 aa31.38■■■□□ 2.61
PBRM1-218ENST00000458294 ASGR1P07306 291 aa31.37■■■□□ 2.61
PBRM1-218ENST00000458294 SLC3A2P08195 630 aaKnown RBP31.37■■■□□ 2.61
PBRM1-218ENST00000458294 FOSL2P15408 326 aa31.37■■■□□ 2.61
PBRM1-218ENST00000458294 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.36■■■□□ 2.61
PBRM1-218ENST00000458294 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.36■■■□□ 2.61
PBRM1-218ENST00000458294 ADCY6O43306 1168 aa31.36■■■□□ 2.61
PBRM1-218ENST00000458294 CDK7P50613 346 aa31.36■■■□□ 2.61
PBRM1-218ENST00000458294 STAT2P52630 851 aa31.36■■■□□ 2.61
PBRM1-218ENST00000458294 ERC2O15083 957 aa31.35■■■□□ 2.61
PBRM1-218ENST00000458294 MFSD5Q6N075 450 aa31.35■■■□□ 2.61
PBRM1-218ENST00000458294 FAM160B2Q86V87 743 aa31.35■■■□□ 2.61
PBRM1-218ENST00000458294 CCDC144CPQ8IYA2 1237 aa31.35■■■□□ 2.61
PBRM1-218ENST00000458294 NAPBQ9H115 298 aa31.35■■■□□ 2.61
PBRM1-218ENST00000458294 ACAD9Q9H845 621 aa31.35■■■□□ 2.61
PBRM1-218ENST00000458294 A0A0U1RQG5 324 aaPredicted RBP31.34■■■□□ 2.61
PBRM1-218ENST00000458294 TMEM232C9JQI7 657 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 IRX5P78411 483 aaPredicted RBP31.34■■■□□ 2.61
PBRM1-218ENST00000458294 TFAP4Q01664 338 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 PPP4R3BQ5MIZ7 849 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 CHURC1Q8WUH1 139 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 GMCL1Q96IK5 515 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 SEC62Q99442 399 aaKnown RBP31.34■■■□□ 2.61
PBRM1-218ENST00000458294 KATNBL1Q9H079 304 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 HOMER2Q9NSB8 354 aa31.34■■■□□ 2.61
PBRM1-218ENST00000458294 NKX3-2P78367 333 aa31.33■■■□□ 2.61
PBRM1-218ENST00000458294 PPARAQ07869 468 aa31.33■■■□□ 2.61
PBRM1-218ENST00000458294 GNASQ5JWF2 1037 aa31.33■■■□□ 2.61
PBRM1-218ENST00000458294 CCDC174Q6PII3 467 aa31.33■■■□□ 2.61
PBRM1-218ENST00000458294 FAM133AQ8N9E0 248 aa31.33■■■□□ 2.61
PBRM1-218ENST00000458294 ARVCFO00192 962 aa31.32■■■□□ 2.6
PBRM1-218ENST00000458294 DNAJB2P25686 324 aa31.32■■■□□ 2.6
PBRM1-218ENST00000458294 PPIGQ13427 754 aaKnown RBP eCLIP31.32■■■□□ 2.62e-11■□□□□ 8.7
PBRM1-218ENST00000458294 PI4K2BQ8TCG2 481 aa31.32■■■□□ 2.6
PBRM1-218ENST00000458294 STAG1Q8WVM7 1258 aa31.32■■■□□ 2.6
PBRM1-218ENST00000458294 VTI1AQ96AJ9 217 aa31.32■■■□□ 2.6
PBRM1-218ENST00000458294 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.32■■■□□ 2.64e-21■■■■□ 19.3
PBRM1-218ENST00000458294 ISY1Q9ULR0 285 aaKnown RBP31.32■■■□□ 2.6
PBRM1-218ENST00000458294 VCANP13611 3396 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 SLC1A4P43007 532 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 CNTN2Q02246 1040 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 TKFCQ3LXA3 575 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 ZMYM1Q5SVZ6 1142 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 FSD1Q9BTV5 496 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 A1CFQ9NQ94 594 aaKnown RBP31.31■■■□□ 2.6
PBRM1-218ENST00000458294 RNF146Q9NTX7 359 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 PRUNE2Q8WUY3 3088 aa31.31■■■□□ 2.6
PBRM1-218ENST00000458294 ZNF536O15090 1300 aa31.3■■■□□ 2.6
PBRM1-218ENST00000458294 TLR3O15455 904 aaKnown RBP31.3■■■□□ 2.6
PBRM1-218ENST00000458294 PLA2G6O60733 806 aa31.3■■■□□ 2.6
PBRM1-218ENST00000458294 IKQ13123 557 aaPredicted RBP31.3■■■□□ 2.6
PBRM1-218ENST00000458294 FAM126BQ8IXS8 530 aa31.3■■■□□ 2.6
PBRM1-218ENST00000458294 CTAGE5O15320 804 aa31.29■■■□□ 2.6
PBRM1-218ENST00000458294 TMEM199Q8N511 208 aa31.29■■■□□ 2.6
PBRM1-218ENST00000458294 AGBL1Q96MI9 1066 aa31.29■■■□□ 2.6
PBRM1-218ENST00000458294 ASB14A6NK59 587 aa31.28■■■□□ 2.6
PBRM1-218ENST00000458294 TNFAIP2Q03169 654 aa31.28■■■□□ 2.6
PBRM1-218ENST00000458294 LRRC37A2A6NM11 1700 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 SOWAHBA6NEL2 793 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 MCCP23508 829 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 GRIN2CQ14957 1233 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 TIFAQ96CG3 184 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 TRERF1Q96PN7 1200 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 STX8Q9UNK0 236 aa31.27■■■□□ 2.6
PBRM1-218ENST00000458294 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.27■■■□□ 2.6
PBRM1-218ENST00000458294 TSPY2A6NKD2 308 aa31.26■■■□□ 2.59
PBRM1-218ENST00000458294 TMEM240Q5SV17 173 aa31.26■■■□□ 2.59
PBRM1-218ENST00000458294 C16orf59Q7L2K0 433 aa31.26■■■□□ 2.59
PBRM1-218ENST00000458294 ZNF576Q9H609 170 aa31.26■■■□□ 2.59
PBRM1-218ENST00000458294 GNEQ9Y223 722 aaKnown RBP31.26■■■□□ 2.59
PBRM1-218ENST00000458294 SPTBN5Q9NRC6 3674 aaKnown RBP31.25■■■□□ 2.59
PBRM1-218ENST00000458294 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.25■■■□□ 2.59
PBRM1-218ENST00000458294 CABYRO75952 493 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 CD4P01730 458 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 ALAS1P13196 640 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 CSF2RAP15509 400 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 RASIP1Q5U651 963 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 RCSD1Q6JBY9 416 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 PSRC1Q6PGN9 363 aaPredicted RBP31.25■■■□□ 2.59
PBRM1-218ENST00000458294 CCDC129Q6ZRS4 1044 aa31.25■■■□□ 2.59
PBRM1-218ENST00000458294 NOL8Q76FK4 1167 aaKnown RBP31.25■■■□□ 2.59
PBRM1-218ENST00000458294 ASTN1O14525 1302 aa31.24■■■□□ 2.59
PBRM1-218ENST00000458294 BEX3Q00994 111 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms