RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 GREB1LQ9C091 1923 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 PPP1R11O60927 126 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 GNAQP50148 359 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 FUT2Q10981 343 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 NTRK3Q16288 839 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 USH1GQ495M9 461 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 COA7Q96BR5 231 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 AIFM3Q96NN9 605 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 PARK7Q99497 189 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 MAP3K14Q99558 947 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 RIOX1Q9H6W3 641 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 HOMER2Q9NSB8 354 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 PNMA3Q9UL41 463 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 RBM19Q9Y4C8 960 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 RIPK3Q9Y572 518 aa10.07□□□□□ -0.8
CLTCL1-204ENST00000458188 PHIPQ8WWQ0 1821 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 ATAD5Q96QE3 1844 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 CCDC196A0A1B0GTZ2 297 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 K7ELQ4 463 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 SSRP1Q08945 709 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 LBX2Q6XYB7 198 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 HSCBQ8IWL3 235 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 REPS2Q8NFH8 660 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 RRP36Q96EU6 259 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 LZTS2Q9BRK4 669 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 SLC38A10Q9HBR0 1119 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 GJB4Q9NTQ9 266 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 ADAMTS5Q9UNA0 930 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 SLC45A1Q9Y2W3 748 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 ZNF536O15090 1300 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
CLTCL1-204ENST00000458188 PTPDC1A2A3K4 754 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 ZBTB5O15062 677 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 TLR2O60603 784 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 PLA2G6O60733 806 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 ALDH1A1P00352 501 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 ALAS1P13196 640 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 FDPSP14324 419 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 IFNAR1P17181 557 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 STAT3P40763 770 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 MCM2P49736 904 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 RCAN1P53805 252 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 WDR78Q5VTH9 848 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 C17orf99Q6UX52 265 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 HEATR3Q7Z4Q2 680 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 NCAPG2Q86XI2 1143 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 NSUN7Q8NE18 718 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 GPRC5AQ8NFJ5 357 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 SNX21Q969T3 373 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 SPZ1Q9BXG8 430 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 MOV10L1Q9BXT6 1211 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 PORCNQ9H237 461 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 EFCC1Q9HA90 598 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 CCPG1Q9ULG6 757 aa10.05□□□□□ -0.8
CLTCL1-204ENST00000458188 MYH8P13535 1937 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 PNMA6FA0A0J9YX94 578 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 FMNL1O95466 1100 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 ERVK-9P63128 1117 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 ERVK-24P63145 666 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 CAP1Q01518 475 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 AKAP17AQ02040 695 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 PPP2R5BQ15173 497 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 PKN1Q16512 942 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 MUM1L1Q5H9M0 696 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 CPLX2Q6PUV4 134 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 MTMR8Q96EF0 704 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 ARHGAP39Q9C0H5 1083 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 SPATC1LQ9H0A9 340 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 ORC3Q9UBD5 711 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 ZNF214Q9UL59 606 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 RABGAP1Q9Y3P9 1069 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 PCDHA1Q9Y5I3 950 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 ADGRA2Q96PE1 1338 aa10.04□□□□□ -0.8
CLTCL1-204ENST00000458188 NID2Q14112 1375 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 DLL1O00548 723 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 ADAMTS3O15072 1205 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 ICAM1P05362 532 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 BCRP11274 1271 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 ERCC3P19447 782 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 SMARCA1P28370 1054 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 CTGFP29279 349 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 GCLCP48506 637 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 FXR1P51114 621 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 GUCY1B3Q02153 619 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 WWC2Q6AWC2 1192 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 TYW1BQ6NUM6 668 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 CCAR1Q8IX12 1150 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
CLTCL1-204ENST00000458188 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms