RNA–Protein interactions for RNA: ENST00000458090.1

AC009963.3-201, humanhuman

BASIC

Gene AC009963.3, Length 486 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.3-201ENST00000458090 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 NDUFB10O96000 172 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 ASGR1P07306 291 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 MRPL12P52815 198 aaKnown RBP7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 GJA9P57773 515 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 TNFAIP2Q03169 654 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 BRDTQ58F21 947 aaPredicted RBP7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 C9orf50Q5SZB4 431 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 MFSD5Q6N075 450 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 PSRC1Q6PGN9 363 aaPredicted RBP7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 ARMCX2Q7L311 632 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 TICAM2Q86XR7 235 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 STK11IPQ8N1F8 1099 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 KLHDC9Q8NEP7 349 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 REPS2Q8NFH8 660 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 NEDD1Q8NHV4 660 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 STAG1Q8WVM7 1258 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 CEP95Q96GE4 821 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 GUCD1Q96NT3 240 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 AP5M1Q9H0R1 490 aa7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 RAVER2Q9HCJ3 691 aaKnown RBP7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 ADD3Q9UEY8 706 aaKnown RBP7.33□□□□□ -1.24
AC009963.3-201ENST00000458090 LOC102724159A0A0B4J2E5 919 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 TMEM232C9JQI7 657 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 SMARCA5O60264 1052 aaPredicted RBP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 SNAI1O95863 264 aaPredicted RBP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 SUPT20HL2P0C7V6 817 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 TFAP4Q01664 338 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 EVX2Q03828 476 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 PPARAQ07869 468 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 FAAP100Q0VG06 881 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 PWP2Q15269 919 aaKnown RBP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 RAB30Q15771 203 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 CCDC144BQ3MJ40 725 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 IQSEC1Q6DN90 963 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 RCSD1Q6JBY9 416 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 RPUSD2Q8IZ73 545 aaKnown RBP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 OSBP2Q969R2 916 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 NUP88Q99567 741 aaPredicted RBP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 UPF3AQ9H1J1 476 aaKnown RBP7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 MSRAQ9UJ68 235 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 STX8Q9UNK0 236 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 Q9Y3F1 56 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 PLIN4Q96Q06 1357 aa7.32□□□□□ -1.24
AC009963.3-201ENST00000458090 RAD50Q92878 1312 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 PRDM1O75626 825 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 FGBP02675 491 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 TAL1P17542 331 aaPredicted RBP7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 DNAJB2P25686 324 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 NT5C2P49902 561 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 SLFNL1Q499Z3 407 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 CCDC144CPQ8IYA2 1237 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 LRRC47Q8N1G4 583 aaKnown RBP7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 IL27Q8NEV9 243 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 MYLIPQ8WY64 445 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 TRERF1Q96PN7 1200 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 COL25A1Q9BXS0 654 aaPredicted RBP7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 ZNF576Q9H609 170 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 GPHNQ9NQX3 736 aaPredicted RBP7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 HOMER2Q9NSB8 354 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 RNF146Q9NTX7 359 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 RIPK3Q9Y572 518 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 MYH6P13533 1939 aa7.31□□□□□ -1.24
AC009963.3-201ENST00000458090 PFKMP08237 780 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 PCP11498 1178 aaKnown RBP7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 ACTN1P12814 892 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 ALAS1P13196 640 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 MX1P20591 662 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 MCCP23508 829 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 CPT1AP50416 773 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 CDK7P50613 346 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 MFAP1P55081 439 aaKnown RBP7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 NKX3-2P78367 333 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 ITGA7Q13683 1181 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 CCDC178Q5BJE1 867 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 CCSAPQ6IQ19 270 aaPredicted RBP7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 TLK2Q86UE8 772 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 DCAF4Q8WV16 495 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 TIFAQ96CG3 184 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 MAF1Q9H063 256 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 SLC28A3Q9HAS3 691 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 VTA1Q9NP79 307 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 HELLSQ9NRZ9 838 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 TOMM22Q9NS69 142 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 POLR3EQ9NVU0 708 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 TBX21Q9UL17 535 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 CCPG1Q9ULG6 757 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 GBF1Q92538 1859 aa7.3□□□□□ -1.24
AC009963.3-201ENST00000458090 SZT2Q5T011 3432 aa7.29□□□□□ -1.24
AC009963.3-201ENST00000458090 M0R2C6 588 aa7.29□□□□□ -1.24
AC009963.3-201ENST00000458090 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
AC009963.3-201ENST00000458090 DYNC1LI2O43237 492 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms